| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2774 |
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| Symbol | |
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| ID | 7970987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2921589 |
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| End bp | 2922590 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793361 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944662 |
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| Protein GI | 239815752 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.555634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCCGA CCTTCAACCT TCCTCATCCC AACCGCCGCC AGATGCTCGC CGGCCTCGCG
TCATTCGCCT CATTCGCCGC CGTCGGCACG GGCGGCACCG CCTTCGCGCA GGGCGCCAAG
TACCCGAGCA AGGCCGTCAC GCTCGTGGTG CCGTATTCCG CCGGCGGCGG CACCGACATC
GTGGGCCGCC TGATGGCACA GCGCCTGTCG GAGCTGTGGG GCCAGTCGGT GGTGGTGGAC
AACCGCACTG GCGCCAACGG CGTGATCGGC TCCAGCACCG TGGCACGCTC GGCGCCCGAT
GGCCACACGC TGCTGCTGGT GGTGGGCTCG CACGCGGTCA ACCCGGTGCT GATGAAGTCG
CTGCCCTACG ACACCGACAA GGCCTTCACG CCCATCACCA ACATCGCGAA CTCGCCGTCG
GTGCTGGTGG TGCAGGCCAA CGGTCCCTAC AAGACGCTGG CCGACCTGCT GGCCGCGGCG
CGCAAGGAAG AGCTGGGCTG CGGCTACTCG GAAGGGCAGA CGCGCCTGAC CGGCGAACTG
ATCCGCCAGG TCGGCAACCT CAAGCTGACT GGCGTGCCCT ACAAGGGCGG CGCGCCGATC
ATGGTCGACA TCATCGGCGG CCACCTGCCG ATGGGCGTGA CCAGCGTGCT GACTGCTCTG
CCGCACGTGC GCTCGGGCGC GCTGCGCGTG GTGGGCGTTG CGGCCGATCG CCGCATGCCG
CTGTTCCCCG ATGCGATGAC CTTCAAGGAA GCGGGGTTGA ACGGTGTCGA ATCGCTGAGC
TGGTATGGCC TGTTCGGCCC GGCCGGCCTG CCGGCCCCGA TCGTCGCGCA GATCAACCAG
GACCTGAAGA AGGTCGCGGC CGACCCCGTG GTGCAAAAGC AGATGCACGA CCAGGGCGCC
GACATCACGC TCACGCCACC GGCCGAGTTC CGCACCTTCC TGGCGAGCGA GACGAAGAAG
TGGTCGCTCG TCGCGCAGCG CGGCGGCATC ACGGCGGAGT AA
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| Protein sequence | MNPTFNLPHP NRRQMLAGLA SFASFAAVGT GGTAFAQGAK YPSKAVTLVV PYSAGGGTDI
VGRLMAQRLS ELWGQSVVVD NRTGANGVIG SSTVARSAPD GHTLLLVVGS HAVNPVLMKS
LPYDTDKAFT PITNIANSPS VLVVQANGPY KTLADLLAAA RKEELGCGYS EGQTRLTGEL
IRQVGNLKLT GVPYKGGAPI MVDIIGGHLP MGVTSVLTAL PHVRSGALRV VGVAADRRMP
LFPDAMTFKE AGLNGVESLS WYGLFGPAGL PAPIVAQINQ DLKKVAADPV VQKQMHDQGA
DITLTPPAEF RTFLASETKK WSLVAQRGGI TAE
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