Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2767 |
Symbol | |
ID | 7970980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2914097 |
End bp | 2914696 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644793354 |
Product | NADP oxidoreductase coenzyme F420-dependent |
Protein accession | YP_002944655 |
Protein GI | 239815745 |
COG category | [R] General function prediction only |
COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.216999 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTACG CAATCATCGG CTTCGGCAGC ATCGGCCAGG CCCTGGCCAA GGCGTTTGCC CGAAGCGGCA TCGAGGTATC CGTTGCAACC ACGCGCGACC CGGAAAGCTT TGCATCCGCC GCGGCCGCGA TCGGGCCCGA GGTCATTCCC AAAACCCTGG CGGAAGCAGT CAAGGCGGAC GTCGTCTTTC TGGCTGTCCG GTTCGAGTCG CACCGGGATG TCGCGAAGGC GCTGCCCAGC TGGCAAGGGA AGACCATCGT CGACGTGACC AATGCCTACG GCGTGTCCCC TGAGGAACTG GGAGGACAGC CTTCTTCCAA GGCCGTCGCG CAGGCTTTCT CTGGTGGACG GCTGGTCAAG GGTTTCAACC ATCTGGCCGC CGCAGTCCTT GAACAAGACC CGGCCGTACA TGGCGGCAGG AGAGTCGTGT TCCTGGCGAG CGACGATGAC GGCGCAGCAG CGGAGATAGG TGCGCTTGCG GAAAACCTCG GTTTCGCGCC GATCAAGCTT GGCGGGCTTT CGGAAGGTGG ACTGCTTGTG CAGGCGCGCG GAAATAGCTG GGGTCAACTG ATCTTCAAGG ACTTGGTCAA GTTCGATTGA
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Protein sequence | MSYAIIGFGS IGQALAKAFA RSGIEVSVAT TRDPESFASA AAAIGPEVIP KTLAEAVKAD VVFLAVRFES HRDVAKALPS WQGKTIVDVT NAYGVSPEEL GGQPSSKAVA QAFSGGRLVK GFNHLAAAVL EQDPAVHGGR RVVFLASDDD GAAAEIGALA ENLGFAPIKL GGLSEGGLLV QARGNSWGQL IFKDLVKFD
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