| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2715 |
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| Symbol | |
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| ID | 7972315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2858949 |
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| End bp | 2860901 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793301 |
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| Product | ABC transporter related |
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| Protein accession | YP_002944603 |
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| Protein GI | 239815693 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTACTC TCAAAAACGT CATTCTTCGC CGCAGCGCCA AGGTTCTGCT CGACGGCGCC
ACCGTCACCA TCAATCCCGG TGAGAAGGTC GGCCTCGTCG GACGCAACGG CGCCGGCAAG
TCGACCCTGT TCGCGCTCTT CAACGGCTCG CTGCACGAGG ACGGCGGCGA CTTCTACGTG
CCCAAGCAAT GGCGCATGGC GCAGGTGGCG CAGGACATGC CCGAAACCGA GGAGTCGGCC
ACCGACTTCG TGGTGGGCGG CGACACCCGG CTGGCCGAAC TGCGCGCCTC GCTGGCTGCC
ATCGAGGCCG CCTACGAAGC CAATCCCGAC GACGCCGACA TCGGCATGGA ACTGGCCCAC
GCCTACACCG ACCTGGCCGA CGCCGGCGAG CACGACGCCG TGCCGCGTGC ACAGGCGCTG
GTGCTCGGGC TGGGCTTCAA GTCGCACGAG CTCGACGAGC CCGTCAACAG CTTCTCGGGC
GGCTGGCGCA TGCGCCTGCA GCTGGCCCGC GCGCTGATGT GCCCGAGCGA CCTGCTGCTG
CTCGACGAAC CCACCAACCA CCTGGACCTG GACGCGCTCG TCTGGCTCGA AGCCTGGCTG
CAGAAGTACG CCGGCACCAT GATCGTCATC AGCCACGACC GCGAGTTCCT CGACGCCGTG
ACCGACGTCA CGCTGCACAT CGCCAACGCC CAGCTCACGC GCTATGGCGG CAACTACAGC
AAGTTCGAGG ACATGCGCGC GCTGCAGATG GAGCAGCAGC AGGTGGCCTT CTCCAAGCAG
CAGGACAAGA TCGCCCACCT GCAGAAGTTC ATCGACCGCT TCAAGGCCAA GGCCAGCAAG
GCCAAGCAGG CGCAAAGCCG GGTCAAGGCG CTGGAGCGCA TGGAAAAGGT CGCGCCGCTG
CTGGCCGAGG CCGACTTCAC CTTCGAGTTC AAGGAGCCGG GCAACATCCC CAACCCGATG
CTCTCGATCA GCAACGCGAG CTTCGGCTAT GAGATCGAGG GCGAAGAGCC CAAGACCATC
CTGCGCGGCG TCAGCCGCTC GGTGCTCGCA GGCCAGCGCA TCGGCATCCT GGGCGCCAAC
GGCCAGGGCA AGTCGACGCT GGTGAAGACC ATTGCGCGCG AAATGGGCGC GCTGGCCGGC
CAGGTCACCG AAGGCAAGGG CCTCAACATC GGCTACTTCG CGCAGCAGGA ACTCGACGTG
CTGCGCCCGC AGGACAACCC GCTCGAGCAC ATGGTGCGCA TGGCGCGCGA ACTGGGCAGC
GCCGTCAAGG AAAGCACCGG CGAGCAGGCG CTGCGCGGCT TTCTTGGCAG CTTCAACTTC
AGCGGCGACA TGGTGAAGCA GCCTGTGGGC ACCATGAGCG GCGGCGAGAA GGCGCGCCTG
GTGCTCGCGA TGATGGTCTG GCAGCGGCCC AACCTGCTGC TGCTGGACGA ACCCACCAAC
CACCTGGACC TGGCCACCCG CGAGGCGCTG GCCGTGGCGC TCAACGAGTT CGAAGGCACG
CTGATGCTGG TGAGCCACGA CCGCGCGCTG CTGCGCTCGG TGTGCGACGA GTTCTGGCTC
GTGGGCCGCG GCGTGGTCGC CGATTTCGAC GGCGACCTCG ACGACTACCA GCGCTACCTG
CTCGACGAAG CCAAGCGGCT GCGCGAGGAA GCCAAGGTGG CCGTGCGCGA AGCCGCCAGC
GCGGCCGCCC CGGCGCCCAG GCAGGACGCC CAGGACCGCC AGCAGCGCAG CGACCAAGCC
AAGCCGATCA AGCGCGAGAT CGCGCAGATC GACGAACGGC TGGTTGCGGC CGGCACCGAG
CGCACCGCGC TCGAGGCGCG CCTGGCGCAG CCGTTGCCGC CAGCCGAGAT TGCCGAGGCG
GGCAAGCGGC TGAAAGCCCT CAACGACGAA ATCGGCCGAC TCGAAGAGCG CTGGCTGGCC
CTGTCGGACC AGCTCGAGGC GCTCGCGGCC TGA
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| Protein sequence | MITLKNVILR RSAKVLLDGA TVTINPGEKV GLVGRNGAGK STLFALFNGS LHEDGGDFYV
PKQWRMAQVA QDMPETEESA TDFVVGGDTR LAELRASLAA IEAAYEANPD DADIGMELAH
AYTDLADAGE HDAVPRAQAL VLGLGFKSHE LDEPVNSFSG GWRMRLQLAR ALMCPSDLLL
LDEPTNHLDL DALVWLEAWL QKYAGTMIVI SHDREFLDAV TDVTLHIANA QLTRYGGNYS
KFEDMRALQM EQQQVAFSKQ QDKIAHLQKF IDRFKAKASK AKQAQSRVKA LERMEKVAPL
LAEADFTFEF KEPGNIPNPM LSISNASFGY EIEGEEPKTI LRGVSRSVLA GQRIGILGAN
GQGKSTLVKT IAREMGALAG QVTEGKGLNI GYFAQQELDV LRPQDNPLEH MVRMARELGS
AVKESTGEQA LRGFLGSFNF SGDMVKQPVG TMSGGEKARL VLAMMVWQRP NLLLLDEPTN
HLDLATREAL AVALNEFEGT LMLVSHDRAL LRSVCDEFWL VGRGVVADFD GDLDDYQRYL
LDEAKRLREE AKVAVREAAS AAAPAPRQDA QDRQQRSDQA KPIKREIAQI DERLVAAGTE
RTALEARLAQ PLPPAEIAEA GKRLKALNDE IGRLEERWLA LSDQLEALAA
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