Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2680 |
Symbol | |
ID | 7972279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2823883 |
End bp | 2824686 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644793268 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_002944571 |
Protein GI | 239815661 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00706693 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATGA CCCGCGTGCT GCGCATTCTC ACGGCCATTC CGCTTGCGTT GATGCTCTAC GCGCTGCTGC TGTTCCTGGG GCTGATTTCG CTGGCCTGGA ACCTCGTCGC GATGCTGCTC TACCCGGTGA TGCCCGAGGC GCCCGCGCGC ACGCTGGGCC GCCTGACCAT CGCCTTCGCC TACCGCATGT TCTGGGGCCT GGCCTCGGTG ACCGGGATGA TGCGAATCGA CGCCAGCTGC CTGGACCCGA TGCGCAACGA GCCGGGCGTG ATCTTCGTGG CCAACCACCC CACCATGCTC GACGCGCTGC TGCTGGTGGC GCGGCTGCCG CGCAGCGCCT GCATCATGAA GGCCGACCTG CTGCGCAACA TCTTCCTGGG CGCGGGCGCA CGGCTGGCGC GCTACATCAG CAACGAGTCG GCCCGCACCA TGGTGCGCCT GGCGGTGGCC GACCTGCGCA ATGGCGGCCA GCTGGTGATC TTTCCGGAAG GCACGCGCAC CGTGACGCCG CCGCTCAATC CCTTCGGCCC CGGCGTGACG CTGATCGCCA AGCTCGCGCA GGCCCCGATC CAGACCGTGT TCATCGAGAC CGACTCGCCC TACCTCAGCA AGGGCTGGCC GCTGTGGCGC GTGCCGCCGC TGCCCATCGT CTTCAGGCTC CGGCTGGGCC AGCGCTTCGC GCCCATGCAG GACAGCCACG TGCTGCAATC GGAGCTCGAA CAATACTTTC GCCAACACAT GGAACAGCGC GCAACCGACG CGTCCCCCGC ATGCCAGACG CCTCGCGCAC ACACCTTGTC CTGA
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Protein sequence | MSMTRVLRIL TAIPLALMLY ALLLFLGLIS LAWNLVAMLL YPVMPEAPAR TLGRLTIAFA YRMFWGLASV TGMMRIDASC LDPMRNEPGV IFVANHPTML DALLLVARLP RSACIMKADL LRNIFLGAGA RLARYISNES ARTMVRLAVA DLRNGGQLVI FPEGTRTVTP PLNPFGPGVT LIAKLAQAPI QTVFIETDSP YLSKGWPLWR VPPLPIVFRL RLGQRFAPMQ DSHVLQSELE QYFRQHMEQR ATDASPACQT PRAHTLS
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