Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2659 |
Symbol | |
ID | 7972421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2803665 |
End bp | 2804609 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644793247 |
Product | Adenosylhomocysteine nucleosidase |
Protein accession | YP_002944550 |
Protein GI | 239815640 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00656032 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATGC GCTGGCGCTC TCTTCTCGCG GCCGGCGTGC TGGCCTTCGG CCTCGCGGGC TGTGCCGGTG TCTACAAGAG CCCGGGCGCC GCCGACGGCA GCGTGCGGCT GGACGACACG CCGCGCATCG CGGTGGTCTC GGCCTTCCAG CCCGAGCTCA CGCTGCTGCT GAACCGGCTC CAGCAGCCGG CCAAGCACAG CGTCAACGGC GTCGAGTTCA CCACCGGCAC GCTCGAAGGC AAGCCGGTGG TGCTGTTTCT CTCCGGCATC AGCATGACCA ACGCGACGAT GAACACGCAG CTGGTGCTCG ACCGCTTTCG CGTCACCCAC ATCGTGTTCA GCGGCATCGC GGGCGGCGTG AATCCGCAGC TGCACGTGGG CGACGTCACG GTGCCCGCGC AATGGGGCCA GTACCTCGAA GTGCTGATGG CGCGCGAAAC CGCGCCGGGC AAGTTCACCG CGCCGCCCTT CATCACCGAT GCCACGCTGC CCAACTTCGG CATGATGCAT CCGCGCCCGG TGGAAGTGCG CTCCGCGGCA CATCCGCAGA TCGTGCGCAA GTTCTGGTTC GAGGCGGACC CGAAGATGCT CGAGGTGGCG CGCAGCATCC GCAATGTCGA CCTGGCGAAC TGCAGCGCCG GCAAGTGCCT GGCGCGCAAG CCCCATCTGG TCGTCGGCGG CAACGGCGTC TCGGGCCAGG CCTTCATGGA CAACAAGGCC CTGCGCGAAT ACACCTTCAA GACCTTCCAG GCCAACGTGC TCGACATGGA AACGGCGGCC GTGGGCATGG TGGCCTACAG CAACGGCGTG CCCTACATCG CCTTCCGCTC CCTCAGCGAC CTGGCGGGCG GCGGCGAAGG CGAGAACGAG ATGGGCACCT TCATGGGCAT TGCGGCCGAC AACTCGGCCA AGGTGATGCT GGCGTTCCTG GCTGCATGGA AATGA
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Protein sequence | MTMRWRSLLA AGVLAFGLAG CAGVYKSPGA ADGSVRLDDT PRIAVVSAFQ PELTLLLNRL QQPAKHSVNG VEFTTGTLEG KPVVLFLSGI SMTNATMNTQ LVLDRFRVTH IVFSGIAGGV NPQLHVGDVT VPAQWGQYLE VLMARETAPG KFTAPPFITD ATLPNFGMMH PRPVEVRSAA HPQIVRKFWF EADPKMLEVA RSIRNVDLAN CSAGKCLARK PHLVVGGNGV SGQAFMDNKA LREYTFKTFQ ANVLDMETAA VGMVAYSNGV PYIAFRSLSD LAGGGEGENE MGTFMGIAAD NSAKVMLAFL AAWK
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