| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2639 |
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| Symbol | |
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| ID | 7972401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2783807 |
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| End bp | 2784580 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793227 |
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| Product | 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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| Protein accession | YP_002944530 |
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| Protein GI | 239815620 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.914403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCTTCA CCGTCCTGGT GCCGGCCCGG CTGGCTTCGA CGCGGCTGCC CAACAAGCCG
CTGGCCGACA TTGCCGGCCT GCCCATGGTG GTGCGCGTGG CCCGGCGTGC CAGCCAATCC
GGCGCCGCGC GCGTGGTGGT GGCGGGCGAC GACGCGGCCA TCGTCGAGGC CTGCGCAAGG
CATGGCGTGG AAGCCATCCT GACCCGCCAG GACCACCCGA GCGGCTCCGA CCGCCTGGCC
GAAGCCTGCG AGCAACTGGG GCTGGACGGC AGCGACATCA TCGTCAATGT CCAGGGCGAC
GAGCCGCTGA TCGACCCTGC GCTCATCGAC GCCGTGGCCT CCGCGCTGGC CGCCCACCCG
GAAGCCGCCA TGAGCACCGC GGCCCACGAG ATCGACTCGC TCGACGACTT CCTGAACCCG
AACGTGGTGA AGGCGGTGCT CGATGCGCAG GGCAATGCGC TGTACTTCAG CCGCGCGCCC
ATTCCGTGGT GGCGCGACGG TTCCGCCAAC GGTGCGCCGC CTTCCGTGCT GCCCGCACCG
GCGCCGCTGC GGCACATCGG CATCTATGGC TACCGCGCCG GCTTCGTGCG CAGCTTTCCT
TCGCTGGCAC CCGCACCCGT CGAGGCCACC GAAGCGCTCG AACAACTGCG CGCGCTGTGG
CACGGGCATC GCATCGCGGT GCACGTCAGC CATGTCGCGC CGGGGCCTGG CGTCGATACT
CCCGCAGACC TCGAGCGCGT GCGCGCGGTC TTCGCCGCCG ATCCGGCGCG CTGA
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| Protein sequence | MSFTVLVPAR LASTRLPNKP LADIAGLPMV VRVARRASQS GAARVVVAGD DAAIVEACAR
HGVEAILTRQ DHPSGSDRLA EACEQLGLDG SDIIVNVQGD EPLIDPALID AVASALAAHP
EAAMSTAAHE IDSLDDFLNP NVVKAVLDAQ GNALYFSRAP IPWWRDGSAN GAPPSVLPAP
APLRHIGIYG YRAGFVRSFP SLAPAPVEAT EALEQLRALW HGHRIAVHVS HVAPGPGVDT
PADLERVRAV FAADPAR
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