| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2634 |
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| Symbol | |
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| ID | 7972396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2779644 |
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| End bp | 2780651 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793222 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_002944525 |
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| Protein GI | 239815615 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.238348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTG TGATCCTCGA CGATTACCAG GACGCCGTGC GCAAGCTGCG CTGCGCCGCC
AAGCTGGACG CGTATGCAGC CAAGGTCTAC ACCAACACGG TCAAGGGCAT CGGGCAGCTC
TCGGTGCGGC TGAAGGATGC CGACGTGATC GTGCTGATCC GCGAGCGCAC CCACATCTCT
CGCCAGCTGA TCGAAAAGCT CCCCAAGCTC AAGCTCATTT CGCAGACCGG GCGCGTGGGC
GGCCATATCG ATGTCACGGC CTGCACGGAG CGCGGCGTGG CGGTGGCCGA GGGCACCGGC
TCGCCGCAGG CGCCTGCCGA GCTGACCTGG GCACTGATCA TGGCGGCCAT GCGCCGCCTG
CCGCAGTACA TCAGCAACCT CAAGCACGGG GCCTGGCAGC AATCGGGGCT CAAGTCGGCC
TCCATGCCGC CCAATTTCGG GCTGGGCTCG GTGCTCAAGG GCAAGACGCT CTGCATCTGG
GGCTACGGCC GCATCGGCCA GCTGGTGGCG CGCTACGGAC AGGCCTTCGG CATGCAGGTG
GTGATCTGGG GGCGCGAGGC AAGCTGTGCC AAGGCACGCT CCGACGGCTT CCAGGTGGCG
CAGAACCGCC ACGAGTTCTT CGCCGCGGCC GACGTGCTGT CGGTGCATCT GCGGCTCAAC
GAGGAAACCA CCGGTCTGGT CAAGCTCGAG GATCTTTCGC GCATGAAGCC GACCGCGCTC
TTCGTCAACA CCTCGCGCGC CGAACTGGTC GAGGCCGATG CGCTGCTTGC TGCGCTCAAC
CGCGGCCGGC CCGGACTGGC GGCGGTCGAC GTGTTCGAGA GCGAGCCGCC GCTGCAGGGC
CATGCGCTGC TGCGGCTGGA GAACTGCATC TGCACGCCGC ACATCGGCTA TGTCGAGCAG
GACAGCTACG AAAGCTATTT CGGCCAGGCT TTCGACAATG TCGTGAGCTT CATCAAGGGC
AACCCCACCA ACATCGTGAA CCCCGGCGCG CTGCAGGTTC GCCGGTGA
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| Protein sequence | MNIVILDDYQ DAVRKLRCAA KLDAYAAKVY TNTVKGIGQL SVRLKDADVI VLIRERTHIS
RQLIEKLPKL KLISQTGRVG GHIDVTACTE RGVAVAEGTG SPQAPAELTW ALIMAAMRRL
PQYISNLKHG AWQQSGLKSA SMPPNFGLGS VLKGKTLCIW GYGRIGQLVA RYGQAFGMQV
VIWGREASCA KARSDGFQVA QNRHEFFAAA DVLSVHLRLN EETTGLVKLE DLSRMKPTAL
FVNTSRAELV EADALLAALN RGRPGLAAVD VFESEPPLQG HALLRLENCI CTPHIGYVEQ
DSYESYFGQA FDNVVSFIKG NPTNIVNPGA LQVRR
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