| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2622 |
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| Symbol | |
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| ID | 7972384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2766729 |
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| End bp | 2767208 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644793210 |
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| Product | protein of unknown function UPF0044 |
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| Protein accession | YP_002944513 |
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| Protein GI | 239815603 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein |
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| TIGRFAM ID | [TIGR00253] putative RNA-binding protein, YhbY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.596131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCA TTCAACTTAC CCCTGCCGAG CGCAAGGTGC ACCGCGCCGA AGCTCACCAC
CTGGATCCGA TCGTCATGGT CGGTGGAGAC GGGCTCACCC CTGCCGTGAA GAAAGAAGCC
GACGCGGCGC TCAAGGCCCA TGGCCTGATC AAGATCCGCG TCTTCTCCGA CGACCGCCTG
GCCCGCGATG CCATGCTGCA AGAGCTCGCC GACGAGCTCG GTGCCGCCCC CATCCAGCAC
ATCGGCAAGC TGCTGGTGCT GTGGCGCCCC AAGCCCGAGA AGGAGCGCGT GGTCGATGAA
GACCGCATGC CCGGCCCGCG CGACATCAAG GTGCTGAAGT ACAGCAAGCG CGGCGGCCAG
CGGCCCGAGA TCAAGACCCT GCGCGTGCTC GGCAACCAGC GCCTCACGCC CGGCGGCACC
ATCAAGCGCG CCAAGGCCAA GCGGCCGCTC TCGGCCAAGA AACGCAACCA GGCAGACTGA
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| Protein sequence | MPAIQLTPAE RKVHRAEAHH LDPIVMVGGD GLTPAVKKEA DAALKAHGLI KIRVFSDDRL
ARDAMLQELA DELGAAPIQH IGKLLVLWRP KPEKERVVDE DRMPGPRDIK VLKYSKRGGQ
RPEIKTLRVL GNQRLTPGGT IKRAKAKRPL SAKKRNQAD
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