| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2596 |
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| Symbol | |
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| ID | 7972358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2739204 |
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| End bp | 2740664 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644793184 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_002944487 |
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| Protein GI | 239815577 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGCA TCACGCCTGC CACCGCCTGC GGCCTGTTCG ACATTGCGGC AACACGTCGC
ATCGAACAGA AAGCGGCCGC CGCCCTGCCT CCTCATGCGC TGATGCAGCG CGCGGGCCTG
GCCGTGGCGC GCCTCGCGAT GGCGCTGGCG CCGCATGCGC GGACGATCTG GATCGCCTGC
GGACCGGGCA ACAACGGCGG CGACGGCTTC GAAGCTGCTG CGCAGCTGCA GCAGCGCGGC
TTCCTGCCGA TCGTGACCTT CGCGGGCGAT GAAAACCGGC TGCCGCCGGA TGCCGGCGCC
TCGCTGCAAC GGGCCCGCGA TGCCGGCGTG ATCTTCGCGC CGGAGCCGCC TGCGGGCTGC
GAGCTGGCGA TCGACGCGCT GCTCGGCATC GGGTCGAGCC GACCGCCCGC GAATGCCATG
GCCGATTGGT TGCGGCGGAT GCATGCGATG GCCGCGCCGG TACTCAGCGT CGATGTGCCC
TCCGGCCTGA ATGCCGACAC CGGCGTTTCG AGCGCCGCGC CTCATCCGGG TGCTCTTTCG
TCCCGCTTCT GCCTGAGCTT CCTGACCCTC AAGCCCGGCC TGTTCACGGC GCAGGGCCGC
GATGCGGCGG GCACGGTCTG GTTCGACGAC CTGGGCTGCA GCAGCGCCGG TGAGCCGCCG
GTCGCGCGCC TGGCGGGCGC ACCGGCGGAT ACCCCGCGCA GCCACGCCTC GCACAAGGGC
AGCTATGGCG ATGTCGCGGT GATCGGCGGC GCATCCGGCA TGGCGGGCGC CGCGCTGCTG
GCCGGCTCCG CCGCGCTGCA TGCGGGCGCG GGCCGCGTGT TCGTCGGCCT GCTCGACGCG
AGCGCGGCCC CGGTCGACCT GGCGCAACCC GAGCTGATGC TGCGTGACGC CAGGTCGCTC
GATCTCTCGG GCATGACGGC GGTCTGCGGA TGCGGCGGCG GCACGGACAT CCGCGCGGTG
CTGCCGCGCG TGCTGGCGAC GGCGGCCGCG CTGGTGCTCG ACGCCGATGC ATTGAACGCC
ATCGCAGTCG ACGGCGCGCT GCAGGCCCAG TTGGCATCGC GTGCGCGGCG CGGCAGGCCG
ACGGTGATCA CTCCGCATCC GCTCGAGGCC GCGCGTCTGC TGGACTGCGC GGCGGCCGAC
ATCCAGGCCG ACAGGCTCGC AGCCGCCCGC AAGCTCGCAT CGCGCTACGG CGTGGTCGCC
GTGCTCAAGG GATCGGGAAC GGTGATTGCC GAAGGCGGCG GCACGCCGCC GGTGCTCAAC
CTGACCGGCA ACGCGAAGCT CGCAACCGCC GGCACCGGCG ACGTGCTCGC GGGAATGATC
GGCGCCGCAC TGGCGGCGCA GCGGCCGCCG TTCGAGGCGG CGCGCGAAGC CGTCTGGCGC
CACGGCCGCA TGGCCGACGC CTGGCCGGCC GGCGCGCCGC CGCTGACGGC CGGCGCACTG
GCGCGCCAGG CGCCCTGCTG A
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| Protein sequence | MQRITPATAC GLFDIAATRR IEQKAAAALP PHALMQRAGL AVARLAMALA PHARTIWIAC
GPGNNGGDGF EAAAQLQQRG FLPIVTFAGD ENRLPPDAGA SLQRARDAGV IFAPEPPAGC
ELAIDALLGI GSSRPPANAM ADWLRRMHAM AAPVLSVDVP SGLNADTGVS SAAPHPGALS
SRFCLSFLTL KPGLFTAQGR DAAGTVWFDD LGCSSAGEPP VARLAGAPAD TPRSHASHKG
SYGDVAVIGG ASGMAGAALL AGSAALHAGA GRVFVGLLDA SAAPVDLAQP ELMLRDARSL
DLSGMTAVCG CGGGTDIRAV LPRVLATAAA LVLDADALNA IAVDGALQAQ LASRARRGRP
TVITPHPLEA ARLLDCAAAD IQADRLAAAR KLASRYGVVA VLKGSGTVIA EGGGTPPVLN
LTGNAKLATA GTGDVLAGMI GAALAAQRPP FEAAREAVWR HGRMADAWPA GAPPLTAGAL
ARQAPC
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