Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2589 |
Symbol | |
ID | 7970067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2731920 |
End bp | 2732516 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644793177 |
Product | polyhydroxyalkonate synthesis repressor, PhaR |
Protein accession | YP_002944481 |
Protein GI | 239815571 |
COG category | [S] Function unknown |
COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.696628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAAA ACCGCTACCT AGAATCATCG GATGACATGG GCATCCATGT GAAGGAGTCC GCAGTGCAGA GCAAGAAGTC CGGGGTCAAG CCGGTGCAAC GTGTAATCAA GAAGTACCCC AACCGAAGGC TCTACGACAC CGAGACATCC ACGTACATCA CGCTCACCGA GGTGAAGCAG CTGGTCATAC AGAATGCCCA GTTCGTGGTG CGCGATGCCA AGACCGGCGA CGACCTCACG CGCAGCATCC TGCTGCAGAT CATCCTCGAG GAAGAGGCGG GCGGTGCGCC CATGTTCACC GAGCAGGTGC TGGCCAACAT CATCCGCTTC TACGGTCAGG CGATGCAGGG CTACATGGGT CCCTATCTCG AGAAGAACAT CCAGGCCATG ACCGAGGTAC AGGCCCAGCT CACCGAAAAG GCCGAAGGCC TCACGCCCGA GATGTGGTCG CGCTTCATGA CCATGCAGTC GCCCATGCTC CAGGGACTCA TGGGCAACTA CGTCGAGCAG TCCAAGAACG TGTTCCTGCA GATGCAGGAG CAGATGCAGA AAAATACCGA GCAGGTCCTG GGCGCATTCG GCATCAAACG CCCCTGA
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Protein sequence | MQQNRYLESS DDMGIHVKES AVQSKKSGVK PVQRVIKKYP NRRLYDTETS TYITLTEVKQ LVIQNAQFVV RDAKTGDDLT RSILLQIILE EEAGGAPMFT EQVLANIIRF YGQAMQGYMG PYLEKNIQAM TEVQAQLTEK AEGLTPEMWS RFMTMQSPML QGLMGNYVEQ SKNVFLQMQE QMQKNTEQVL GAFGIKRP
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