| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2585 |
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| Symbol | |
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| ID | 7970062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2727169 |
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| End bp | 2727939 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793172 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_002944477 |
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| Protein GI | 239815567 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0102816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAAC GCAAAACCGC GCTTGTCACG GGGTCCACCA GCGGCATTGG CTTGGCCATT
GCCAAGTCGC TTGCACAACA AGGCGCAAAC ATCGTGCTCA ACGGTTTCGG CGACGCCGAA
ACCCCCAAGT CCCAGATCGA GGCGCTCGGC GTGCGCGCCG AATACCACGG CGCCGACATG
AGCCAGCCCG CTCAGATCGA GGACATGATG AAGTTCGCCG CGTCCAGATT CGGGCGCGTC
GACATCCTCG TGAACAACGC CGGCATCCAG CACGTGGCAA AGGTCGAGGA CTTCCCGCCG
GAACGCTGGG ACGCCATCAT CGCCATCAAC CTCACGAGCG CATTCCACAC GACCCGGCTC
GCCATACCCG CGATGCGCGA GGCCAACTGG GGCCGCATCA TCAACGTGGC ATCGGCCCAC
GGCCTGGTGG CCTCGGCGCA GAAGTCGGCC TACGTGGCGG CCAAGCACGG CATCGTGGGC
TTCACCAAGT CGGTGGCGCT CGAAACCGCA ACCACCGGCA TCACGAGCAA TGCAATCTGC
CCAGGCTGGG TGCTGACGCA GCTGGTGCAA AAGCAGATCG ACGACCGCGC GGCGCGCGAA
GGCATCTCGG CCACGCAGGC GCAGAACGAG CTGCTCGGGG AAAAGCAGCC TTCGCTGCAG
TTCACCACGG TCGAGCAGCT CGGCGGCCTG GCGGTGTTCC TGTGCTCGCC GGCCGCCGAC
CAGGTGCGCG GCGTCGCCTG GCAGATGGAC GGCGGCTGGA CCGCTCAATA A
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| Protein sequence | MLKRKTALVT GSTSGIGLAI AKSLAQQGAN IVLNGFGDAE TPKSQIEALG VRAEYHGADM
SQPAQIEDMM KFAASRFGRV DILVNNAGIQ HVAKVEDFPP ERWDAIIAIN LTSAFHTTRL
AIPAMREANW GRIINVASAH GLVASAQKSA YVAAKHGIVG FTKSVALETA TTGITSNAIC
PGWVLTQLVQ KQIDDRAARE GISATQAQNE LLGEKQPSLQ FTTVEQLGGL AVFLCSPAAD
QVRGVAWQMD GGWTAQ
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