Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2512 |
Symbol | clpX |
ID | 7969905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2649824 |
End bp | 2651089 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644793096 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_002944404 |
Protein GI | 239815494 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAA AAAAAGGCTC CTCCAGCGAA AAAACGCTTT ATTGCTCGTT CTGCGGCAAG AGCCAGCATG AGGTCAAGAA GCTGATCGCG GGCCCTTCGG TCTTCATTTG CGACGAGTGC ATCGACCTTT GCAACGAAAT CATCCGCGAC GAGCTCCCGG CCGGTGAAGA GGCGCGCGAG GCGCGCAGCG ACCTGCCCAC GCCGCTGGAA ATCAAGACCA ACCTCGACAA CTACGTGATC GGCCAGGAGC CGGCCAAGCG CATGCTGTCG GTGGCGGTCT ACAACCACTA CAAGCGCCTG CGCCACAAGG AAAAGGCCAA GGGCGACGAC GTCGAGCTCA GCAAGAGCAA CATCCTCCTG ATCGGCCCCA CGGGCTCGGG CAAGACGCTG CTCGCGCAAA CGCTCGCGCG CATGCTCGAC GTGCCCTTCG TGATGGCCGA CGCCACCACG CTGACCGAAG CCGGCTACGT GGGCGAGGAC GTCGAGAACA TCATCCAGAA GCTGCTGCAA AGCTGCAACT ACGAAGTCGA GCGCGCCCAG CGCGGCATCG TCTACATCGA CGAGATCGAC AAGATCTCGC GCAAGTCGGA CAACCCGTCC ATCACGCGCG ACGTGTCGGG GGAGGGCGTG CAGCAGGCGC TGCTCAAGCT CATCGAAGGC ACCATGGCCA GCGTGCCGCC ACAGGGCGGG CGCAAGCACC CGAACCAGGA CTTCCTGCAG ATCGACACGA CCAACATCCT GTTCATCTGC GGCGGCGCCT TTGCCGGCCT CGAGAAGGTC ATCGAGAACC GCACCGAGGC CTCGGGCATC GGCTTCGGCG CCTCGGTCAA GAGCAAGGCG CAGCGCAGCA TCACCGAGGT GTTCCGCGAG GTCGAGCCCG AAGACCTGAT CAAGTTCGGC CTGATCCCCG AACTGGTGGG CCGCATGCCC GTGGTCGCCT CGCTGGCCGA GCTCAGCGAA GACGCGCTGG TGCAGATCCT GACCGAGCCC AAGAACGCCG TGGTCAAGCA GTTCACCAAG CTGCTGCAGA TGGAAGGCGT CGACCTGGAG ATCCGTCCCG CGGCGCTCAA GGCCATTGCA CGCAAGGCGC TGGCCCGCAA GACCGGCGCG CGGGGCCTGC GTTCGATCCT CGAACAGTCG CTGATCGACA CCATGTTCGA GCTGCCGAAT GCCACCAACG TCGACAAGGT TGTGGTCGAG GAATCCACAA TTGATGAAAA CAAGCCGCCG CTGCTCGTGT ACCGCGAAGC GGCCAAGAAG GCCTGA
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Protein sequence | MAEKKGSSSE KTLYCSFCGK SQHEVKKLIA GPSVFICDEC IDLCNEIIRD ELPAGEEARE ARSDLPTPLE IKTNLDNYVI GQEPAKRMLS VAVYNHYKRL RHKEKAKGDD VELSKSNILL IGPTGSGKTL LAQTLARMLD VPFVMADATT LTEAGYVGED VENIIQKLLQ SCNYEVERAQ RGIVYIDEID KISRKSDNPS ITRDVSGEGV QQALLKLIEG TMASVPPQGG RKHPNQDFLQ IDTTNILFIC GGAFAGLEKV IENRTEASGI GFGASVKSKA QRSITEVFRE VEPEDLIKFG LIPELVGRMP VVASLAELSE DALVQILTEP KNAVVKQFTK LLQMEGVDLE IRPAALKAIA RKALARKTGA RGLRSILEQS LIDTMFELPN ATNVDKVVVE ESTIDENKPP LLVYREAAKK A
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