| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2418 |
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| Symbol | |
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| ID | 7970462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2584138 |
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| End bp | 2584905 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793000 |
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| Product | ABC transporter related |
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| Protein accession | YP_002944310 |
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| Protein GI | 239815400 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAGA CCAAAGACCT GACCATCCGC TTCGGCGGGC ACGTGGCCGT CAACGGCGTG
AGCTGCGCCT TCGCGCCGGG CACGCTGACG GCCATCGTCG GCCCCAACGG CGCGGGCAAG
ACCACCTACT TCAACCTGAT CTCGGGCCAG CTCAAGGCGA GCGCGGGCAC GGTGTCGCTC
GACGGGCAGC TGCTGTCGGG CCTGTCGCCG TCAGCGCGCA CGCACGCGGG GCTGGGGCGG
GCCTTCCAGC TCACCAACCT GTTCCCGAAC CTCACGGTGC TGGAGAACGT GCGCCTCGCG
GTGCAGGCCA CGCGGGAGGG CGCGCACCGG CGCGGCCTCA ACCTCTGGAG CATCTGGAGC
GACCACAAGG CACTGACCGA GCGCGCCGAC CAGATCCTCG CGGACGTGGC GCTGAAGTCG
CGCGAGCACG CGACGGTGGC GAGCCTGCCG CACGGCGACC AGCGCAAGCT CGAGGTGGCG
CTGCTGATGG CGCTCGAACC CAAGGTCTTC ATGTTCGACG AGCCCACGGC CGGCATGAAC
GCGGCCGAGG CGCCGGTCAT CCTGGACCTG ATCCGCAGGC TCAAGCAGGA CAAGACCAAG
ACCATTCTCC TGGTCGAACA CAAGATGGAC GTGGTGCGCG AACTCGCGGA CCGCATCATC
GTGCTGCACA ACGGCACGCT GGTGGCGGAT GGCGAACCGG CGGAGGTGAT TGCCTCGCCG
GTGGTGCAGG AAGCCTACCT GGGCATTGCG AAGGAGGCTG CGGCATGA
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| Protein sequence | MLETKDLTIR FGGHVAVNGV SCAFAPGTLT AIVGPNGAGK TTYFNLISGQ LKASAGTVSL
DGQLLSGLSP SARTHAGLGR AFQLTNLFPN LTVLENVRLA VQATREGAHR RGLNLWSIWS
DHKALTERAD QILADVALKS REHATVASLP HGDQRKLEVA LLMALEPKVF MFDEPTAGMN
AAEAPVILDL IRRLKQDKTK TILLVEHKMD VVRELADRII VLHNGTLVAD GEPAEVIASP
VVQEAYLGIA KEAAA
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