| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2379 |
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| Symbol | |
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| ID | 7970422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2542101 |
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| End bp | 2544431 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792961 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_002944272 |
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| Protein GI | 239815362 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.269949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCACTG ATTCCATCCC CACCCGTTTC GGCAGCGGCC AGGCAGTGCG CCGCCTCGAG
GACGAGAGCC TGCTGTCCGG CGCAGGCCGC TATACCGACG ACGTCGCGCT CCCCGGCCAG
ACGCATCTCG TCTTCCTTCG GTCTCCCTAT CCGCATGCGC GCATCGTGTC GATCGACACG
GCCGCCGCTG CCGCCATGCC CGGCGTGCTG CGCGTGATCA CCGGCGCCGA GCTGGCCGAG
GCCGGCGTCA AGCCGATGCC GGGCGCCGTG GGCTTCAAGC GGGCCGACGG CAGCGATTGC
GCCAGCCCTC CGCGCCTGGC CCTGGCGCAT GGCACAGCCC GCTTCGTGGG CGAGGCCGTG
GCCGCGGTGG TGGCCGAAAC CGTCCAGCAG GCACGCGATG CCGCCGAGGC GGTGGTGGTC
GACTACGAAG CGCTTCCCAT GGTGGTCGAC CTCGCAAGCG CCACCGCCGA CGGCGCGCCG
CTGCTGTGCG AGGAGGCCAC CGGCAACGTC GCCGCCGAAA TGCGCCATGG CAGCAGCGAC
GCCGCAACCG CCGCCTTTGC CAAGGCCAAG CACGTGGTGG CGCTCGACGT GGTCAACCAG
CGCGTGGTGG CGCTGACCAT CGAGCCGCGC TCGGTGCTCG CCGCGCCTGA CGCCGAATCG
GGCCGCCTCA CCATCCGCAT GAGCACCCAG ATGCCGTCGG GCGTGCGCGA TTCGGTGTGC
GCCGCCATCG GCCTCGCCAA GGAAAAGGTG CGCGTGGTGG TGGGCGACGT GGGCGGCGGC
TTCGGCATGA AGACCGGCGC CTATCCGGAG GACATTGCCG TTGCGTTTGC GGCGCTGCAG
GTCGGGCGCC CCGTGAAGTG GGTGGCCGAC CGCAGCGAGG AGTTTCTTTC GAGCGCGCAC
GGCCGCGACA TCGAGGCCAG GGCTGAGCTC GCGCTCGATG CGGACGGAAA GATCCTTGCG
CTGCGCATCA GGACGCTGGC CAACGTCGGG GCCTATGCCA CCGGCACCGG CGTTGCGATC
CAACTGCTGA TCGGCCCCTG GGTGCAGACC AGCGTCTACG ACATCCAGAC CATCGACTTC
CATTTCAAGG CGGTGCTCAC CAACACCGCG CCCACTGGCG CCTACCGCGG TGCGGGCCGT
CCCGAGGCGA TCTTCACCAT CGAGCGCCTG ATGGACGAGG CCGCCCGCCA GATCGGCATC
GACCGCATCG CGCTGCGCCG CCGCAACTTC ATCCGCCCCG AGCAGATGCC CTACAAGAAC
CCGATGGCGC AGACCTACGA CACCGGCAAG TTCGAGTCGG TGATGGACCA GGCGCTGGCG
CTGGCCGACT GGCAGGGTTT CGACGCCCGG GCCGCCGAGT CGGCGAACAA CGGCAAGCAC
CGCGGCCTGG GCATTGCCAC CTTTCTCGAA TGGACCGGCG GCAATGTGTT CGAGGAGCGC
GTCACGGTCT CGGTGCAGGC CGATGGCGTG ATCGAGGTGT TCTCCGCCGT CAACGCCATG
GGGCAGGGCA TTGCCACCTC GCTTGCGCAG CTGGCGGTCG ATGCCTTCGG CGTGCCGATC
GAGAAGGTGC GCGTCGTGCT CGGCGACACC GACCGCGGCG ACGGCTTCGG CAGCGCTGGT
TCGCGCTCTC TCTTCACCGG CGGCTCGGCG GTCCGCATCG GCGCCGAACG CACCATCGAC
AAGGCGCGCG CACTCGCAGC CCAGGAGTTC GAAGCCGCCA TCGACGACAT CACCTACACC
CGCGGTGTCT TCACGGTGGC CGGCACCGAC CTCGAACTCG ACCTGTTCGC CCTGGCAGGC
AAGCAGCCCG AGCGCGAGAT ATTCGTCGAC TCCACCAGCA CCGTGGCCGG TCCGACCTGG
CCCAACGGCT GCCACGTCTG CGAGATCGAG ATCGATCCGC CCACGGGCGA GATCAGCGTG
GTGGCCTACA GCTCGGTCAA TGACGTGGGC CGCGTGATCA ACCCGATGAT CGTTCGCGGC
CAGCTCGAAG GCGGCGCGGT GCAAGGCATC GGCCAGGCGC TGTACGAGCA GGTGGTGTAC
GACAACGAAA CCGGCCAGCC GCTCACCGGC AGCCTCATGG ACTACGCGGC GCCGCGCGCG
GACATCGTCC AGGCCATGTT CCACATGGAG ATGGACGAGT CGACGCCGTG CGCCAACAAC
CCGCTGGGCG TGAAGGGCGT GGGCGAGCTG GGCACCATCG GCGCCACGCC CGCCATCGTG
AACGCCGTGG CCGACGCCTT CGCGCGCAAC GGCCTTGCGG CCAGCGCTCC GCGCCTGCAC
ATGCCGCTGA GCCCGGCGCG CGTGTGGCAG GCCATGCACA CCGTCGATTG A
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| Protein sequence | MTTDSIPTRF GSGQAVRRLE DESLLSGAGR YTDDVALPGQ THLVFLRSPY PHARIVSIDT
AAAAAMPGVL RVITGAELAE AGVKPMPGAV GFKRADGSDC ASPPRLALAH GTARFVGEAV
AAVVAETVQQ ARDAAEAVVV DYEALPMVVD LASATADGAP LLCEEATGNV AAEMRHGSSD
AATAAFAKAK HVVALDVVNQ RVVALTIEPR SVLAAPDAES GRLTIRMSTQ MPSGVRDSVC
AAIGLAKEKV RVVVGDVGGG FGMKTGAYPE DIAVAFAALQ VGRPVKWVAD RSEEFLSSAH
GRDIEARAEL ALDADGKILA LRIRTLANVG AYATGTGVAI QLLIGPWVQT SVYDIQTIDF
HFKAVLTNTA PTGAYRGAGR PEAIFTIERL MDEAARQIGI DRIALRRRNF IRPEQMPYKN
PMAQTYDTGK FESVMDQALA LADWQGFDAR AAESANNGKH RGLGIATFLE WTGGNVFEER
VTVSVQADGV IEVFSAVNAM GQGIATSLAQ LAVDAFGVPI EKVRVVLGDT DRGDGFGSAG
SRSLFTGGSA VRIGAERTID KARALAAQEF EAAIDDITYT RGVFTVAGTD LELDLFALAG
KQPEREIFVD STSTVAGPTW PNGCHVCEIE IDPPTGEISV VAYSSVNDVG RVINPMIVRG
QLEGGAVQGI GQALYEQVVY DNETGQPLTG SLMDYAAPRA DIVQAMFHME MDESTPCANN
PLGVKGVGEL GTIGATPAIV NAVADAFARN GLAASAPRLH MPLSPARVWQ AMHTVD
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