Gene Vapar_2343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2343 
Symbol 
ID7971201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2506639 
End bp2507790 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content70% 
IMG OID644792925 
Productmolybdenum cofactor biosynthesis protein A 
Protein accessionYP_002944236 
Protein GI239815326 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2896] Molybdenum cofactor biosynthesis enzyme 
TIGRFAM ID[TIGR02666] molybdenum cofactor biosynthesis protein A, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.235771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGCA AAAGCACCAC CGTCATTCCG CTCTCCGAGG TCGGCCGCGC GCGCCCCGCC 
GTGGCGGTTC CGGAGGTGGC CGTGCCCGCC ACCGGGCGGC TGCTCGACCG CCTGGGCCGG
CCGCTCACCG ACCTGCGCAT CAGCGTGACC GACCGCTGCA ACTTCCGCTG CAGCTACTGC
ATGCCGAAGG ACGTGTTCGA CAAGGACTAC CAGTACCTGC CGCACAGCGC GCTGCTGAGC
TTCGAGGAAA TGACCCGGCT CGCGCGCCTG TTCGCGGCCC ATGGCGTGCG CAAGATCCGC
CTCACCGGCG GCGAGCCGCT GCTGCGCAAG AACATCGAGG CGCTGATCGC GCAGCTCTCT
GAAATCCGCA CCCCGGGCGG CGAACCGCTC GCGCTCACGC TCACCACCAA CGGCTCGCTG
CTGCAGCGCA AGGCGGCCGC GCTGGCCGCC GCCGGCCTGC AGCGTGTGAC CGTGAGCCTC
GACAGCCTGG ACGATGCGGT CTTCCGCCAC ATGAACGACG TCGATTTTCC GGTGGCCGAC
GTGCTCGCCG GCATCGAGGC GGCGCTGGCC GCGGGCCTCG GTCCGCTGAA GGTGAACATG
GTGGTCAAGC GCGGCACCAA CGAGCAGGAA ATCCTGCCGA TGGCGCGCTA CTTCCGCGAC
CACCACGGCG GCAAGGTGGT GCTGCGCTTC ATCGAATACA TGGACGTGGG CGCCACCAAC
GGCTGGCGCA TGGACGAGGT GCTGCCCTCG GCCGAGGTCA TTGCGCGCAT CGGCGCCGAG
TTTCCGCTGG TGCCGCTCGA GCCCAGCGCG CCGGGCGAAA CCGCCCAGCG ATGGGCCTAC
GCCGACGGCG GCGGGGAAAT CGGCGTGATC AGCAGCGTGA CCCAGGCCTT CTGCCACGAC
TGCAGCCGTG CGCGCCTGTC CACCGAGGGC AAGCTCTACC TCTGCCTCTT CGCGAGCGCG
GGCCACGACC TGCGCCCCCT GCTGCGCGGC ACCGCCACCG ACGAGGACAT CGGCTCCGCC
ATCGGCCACA TCTGGCAGGG CCGCGCCGAC CGCTATTCCG AACTGCGCGC GCTGCGCGGC
CCCGACAGCG GCGAGCACGA CGCCAACAAC CCCGCGCCGC GCCGCGTCGA AATGAGCTAC
ATCGGCGGAT GA
 
Protein sequence
MNRKSTTVIP LSEVGRARPA VAVPEVAVPA TGRLLDRLGR PLTDLRISVT DRCNFRCSYC 
MPKDVFDKDY QYLPHSALLS FEEMTRLARL FAAHGVRKIR LTGGEPLLRK NIEALIAQLS
EIRTPGGEPL ALTLTTNGSL LQRKAAALAA AGLQRVTVSL DSLDDAVFRH MNDVDFPVAD
VLAGIEAALA AGLGPLKVNM VVKRGTNEQE ILPMARYFRD HHGGKVVLRF IEYMDVGATN
GWRMDEVLPS AEVIARIGAE FPLVPLEPSA PGETAQRWAY ADGGGEIGVI SSVTQAFCHD
CSRARLSTEG KLYLCLFASA GHDLRPLLRG TATDEDIGSA IGHIWQGRAD RYSELRALRG
PDSGEHDANN PAPRRVEMSY IGG