| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2336 |
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| Symbol | |
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| ID | 7971194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2500106 |
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| End bp | 2500939 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792918 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002944229 |
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| Protein GI | 239815319 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.544063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCGC GCCTGAACGA ACGCAATGCG CGCTTCTGGC AGCTGGTGCT GCTCGCGATC
ATCCTGGTGG GCTGGCACCT GGCGTCGCGC AACCAGCAGA TCGCCTTTTT CCTGGGCGAG
CCGATCCAGG TGGCGGGGCG CATCTGGAGC TGGTTCCTGC CGTTCGAGGT GCCGCCGAAC
CTGCTGTTTC CTGAAGGCCT GAAGGGCAAT GCCGACATCT ACCGGCACCT GGGCACCACG
CTGCTCGAGA CGGTGCTGGC CTTCGGCATC GGCACCGTGC TGGGCCTGGC CTGCGGGCTC
TGGCTGGCGC TGGCACCCAC CGCGAGCCTG ATCCTCGATC CCTACATCAA GGCCGCCAAC
TCGATGCCGC GCGTGATCCT CGCGCCGATC TTCGCGCTGT GGTTCGGCCT CGGCATCTGG
AGCAAGGTGG CGCTGGCCGT CACGCTGGTG TTCTTCATCG TGTTCTTCAA CGTCTACCAG
GGCGTGCGCG AGGTGAGCCC GGTGGTGCTG GCCAACGCGA AGATGCTCGG CGCCAACCAG
CGGCAGCTGC TTCGCACGGT CTACCTGCCG AGCGCGACGA GCTGGGTGTT CTCGAGCCTG
CACACTTCGG TGGGCCTGGC CTTCGTCGGC GCCGTGGTCG GGGAGTACCT GGGCTCGGCG
CGCGGCGTGG GCTACCTGAT CCTGCAGGCC GAGGGCACCT TCGACGTGAA CACCGTCTTT
GCCGGCATCG TGGTGCTGAC GGCCTTTGCG CTCTTGCTCG ACGGCCTGGT CGGCCTCATC
GAGAAGCGCC TCATGAAGTG GCAGCCGCGC AGCGGCGAAA CCGAAAAGCT CTAG
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| Protein sequence | MMPRLNERNA RFWQLVLLAI ILVGWHLASR NQQIAFFLGE PIQVAGRIWS WFLPFEVPPN
LLFPEGLKGN ADIYRHLGTT LLETVLAFGI GTVLGLACGL WLALAPTASL ILDPYIKAAN
SMPRVILAPI FALWFGLGIW SKVALAVTLV FFIVFFNVYQ GVREVSPVVL ANAKMLGANQ
RQLLRTVYLP SATSWVFSSL HTSVGLAFVG AVVGEYLGSA RGVGYLILQA EGTFDVNTVF
AGIVVLTAFA LLLDGLVGLI EKRLMKWQPR SGETEKL
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