| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2324 |
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| Symbol | |
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| ID | 7971181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2484127 |
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| End bp | 2486721 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644792906 |
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| Product | exonuclease-like protein |
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| Protein accession | YP_002944217 |
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| Protein GI | 239815307 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2887] RecB family exonuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.884454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAG GCCACCCCGT CCAGGCCCTG TGGTGCGACC CCGCCGGCGG CGTCGTCGCG
CGCATTGCCG GCGCCGTTGC GCAGCACGGG CTGCATGCGG CGCGCACCGT GGTGCTGGTG
CCGTACGCGC AACTGATGGG TGTGGCCCAC GGCATGTGGT CGCGCTGCGG CAGCCCCGGC
TTCGCGCCGC GCTTCGAGAC CACGCGCAAC TGGGCACGCA GCGCGGGGGG CTTCCTGCCC
ACGGGCTACG ACATCGCCTT CGACATGGCG CGCGACCTGG TCACGGCCCA GGCGCTGCTG
TCGCAGGCCG GCTTTGCCGC CGAACGCTTC GCGCTGGCCG GGCGCGTGGT CGAGCTGGCC
TACCAGCTGG CGCCCCTGGC GGCCGCCGCG CTGCCCGAGG TACGCGGCAG CGAATGGGCG
CAGCGCGCGG CGCAGGTGGC CGATGCGGGC AGCGAGTCGG AATGGTTCCG CATCGAAAGC
GCGCTGATCC GCGTCGCGGT GGCCTGGGCC GCCAATTCGG GCTATGCCAC CGATGTGCTG
CTGCGCGACA CCGTGCGTGC GCAGGTCGAT GCGCTGATCG TGCTCGAAGG CTTCCAGGCC
GATCCGCTCA CGCAGACGCT CTGCAGCCTG TGGGGCGACC GCGCCATCCA TCTCTCGCTG
GTGCCCGCGA GCCCTGCGGC CACCACGGCA GCCGCGCATG TCGCCGCCGA CCCTGAAGAC
GAGGCGGAAC TGGCCGCCGC CTGCGTGCTG CGGCACCTGG CCGAGGGCCG CGCGCCGGTG
GCACTGATCG CGACCGACCG GGCGCTCACG CGGCGCATCG GCGCACAGCT CCAGGCGCAG
GGTGTCACGG CGCACGATGA AACCGGCTGG AAGCTTTCCA CCACGCGCGC CGCCGCCACC
GTGATGAGCG CACTGCGCGC CTGCGCGCAC GACGCCGGCA GCGACCAGGT GCTCGAATGG
CTCAAGAGCG GCGCCGACGG CGATGCGCTC GCCACCCAGG CCCTCGAAGC CCGGCTGCGG
CGCGAAGGCG TGCGCGAGTG GTCCGCCTGG TGCGGCCAGG CCGCGCGCAG CGAGAAGCCG
CAGGACATCG CGCTGCTGCC TTTCACCGAA GCCGTCGAAG GCCGCCGCAT GGCCATGGCC
CGCTCCCGGC CCCTGGCCGA CTGGCTGCGC GCGCTGCGCG AACTGCTCGA GGCCGGGGAG
CAATGGGAGC CGCTCGCAGC CGACATGGCC GGCGCCAAGG TGATCGGCGC CTTGTGGCTC
GATGCCGATG CCCACGGCGA CGACGACGAA TTTCCCGGCG GACGCCACAC GCTGGCCGAG
TTCACGGCCT GGGTGCGCGA CGTGCTGGAG GACGCCAGCT TCGTGCCGCC CGCCGGCAAC
GAGGCGCCGC AGGTGGTGGT GCTGCCGCTG CACCAGTTGC TCGGCCGCGC GTTCGGCGCC
GTGGTCATTC CCGGCTGTGA CGACCGGCGC CTGCCCGCAT CGCCCGAGCC GCCCGGCAAC
TGGAGCGCCG CGCAGCGCGC CGAACTGGGC CTGCCCGCGC GCGAAACGCT CGAGGCCGCG
CAACGCTCGG CCTGGGCCGC GGCCTTGTGC AACCCGTGCT GCGAAGTGCT GTGGCGCCAG
TCGGATGCGA GCGGCGAGCC GGTGCGTCCG AGCCCGCTGG TGCAGGCGCT GCAACTCGAC
CACGCCTTGC AGATGGCGGC GGACCCGCGC ACGCCGCGCG AGGTGGCGCT GCAGCCGACC
GCTTACCCCA CGCCCTCAGG CGAGCTGCTG CCGTTGCGCA ACATCTCGAC CAGCGTCTAT
GAAGACCTGC GCCGCTGCCC CTACCGCTTC TTCGCGCTGC GGCAGCTGGG CCTGCGCAGT
GCCGACGAAC TCGATGCCGA AGTCGACAAG CGCGACTTCG GCAACTGGCT GCATGCCGCG
CTGGGCCATT TCCACGAGGC GCTGAAAGAG AAGCCGACCA GCGATGCCGC CGAGCGTGTG
GCGTACATCA GTGCAGCGGC CGAGCGCGCC ACACGCGAGT TCGGACTGTC CGATGCCGAG
TTCCTGCCCT TCGCCGCGGC ATGGCCGGCG GTGCGCGACG GCTACCTTCA ATGGCTTGCC
GGACACGAGG CGAGCGGCGC CGTGTTCGCC GAATCCGAGC CCTGGATGGA ACAGCCGCTG
GGCAGCCTGC AGTTGGTCGG CCGGCTGGAC CGCATCGACC GCATGCCGGA CGGCCAGGCT
TTCGTGATCG ACTACAAGAC CGAGTCGGCC GCAGTGACCA AGGAGCGCGT GAAGGACCCG
ACCGAGGACA CGCAGCTCGC CTTCTATGCC GCGCTGGTGG CCGACGACAC GCTGCGCGCG
GCCTACGTCA ACGTCGGCGA AAAATCGTCC GGCACGCAGA CCGTCGAGCA GCCCGTGGTG
GTGGAGGCGC GCGATGCGCT GGTGGCCGGC ATCCTCGACG ACTTCACCCG CATCGCCGAG
GGCGCGGCGC TGCCGCCGCT GGGGGAGGGC GCTGTTTGCG ATTACTGCGC GGCGCGCGGG
CTTTGCAGAA AAGACTTCTG GGAGATCGAG CAGCCTGCGC CTTCGTCACC GGCCGAGGGA
GGGCCCGCGA AATGA
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| Protein sequence | MNEGHPVQAL WCDPAGGVVA RIAGAVAQHG LHAARTVVLV PYAQLMGVAH GMWSRCGSPG
FAPRFETTRN WARSAGGFLP TGYDIAFDMA RDLVTAQALL SQAGFAAERF ALAGRVVELA
YQLAPLAAAA LPEVRGSEWA QRAAQVADAG SESEWFRIES ALIRVAVAWA ANSGYATDVL
LRDTVRAQVD ALIVLEGFQA DPLTQTLCSL WGDRAIHLSL VPASPAATTA AAHVAADPED
EAELAAACVL RHLAEGRAPV ALIATDRALT RRIGAQLQAQ GVTAHDETGW KLSTTRAAAT
VMSALRACAH DAGSDQVLEW LKSGADGDAL ATQALEARLR REGVREWSAW CGQAARSEKP
QDIALLPFTE AVEGRRMAMA RSRPLADWLR ALRELLEAGE QWEPLAADMA GAKVIGALWL
DADAHGDDDE FPGGRHTLAE FTAWVRDVLE DASFVPPAGN EAPQVVVLPL HQLLGRAFGA
VVIPGCDDRR LPASPEPPGN WSAAQRAELG LPARETLEAA QRSAWAAALC NPCCEVLWRQ
SDASGEPVRP SPLVQALQLD HALQMAADPR TPREVALQPT AYPTPSGELL PLRNISTSVY
EDLRRCPYRF FALRQLGLRS ADELDAEVDK RDFGNWLHAA LGHFHEALKE KPTSDAAERV
AYISAAAERA TREFGLSDAE FLPFAAAWPA VRDGYLQWLA GHEASGAVFA ESEPWMEQPL
GSLQLVGRLD RIDRMPDGQA FVIDYKTESA AVTKERVKDP TEDTQLAFYA ALVADDTLRA
AYVNVGEKSS GTQTVEQPVV VEARDALVAG ILDDFTRIAE GAALPPLGEG AVCDYCAARG
LCRKDFWEIE QPAPSSPAEG GPAK
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