| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2316 |
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| Symbol | |
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| ID | 7971173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2475411 |
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| End bp | 2476103 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792898 |
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| Product | two component transcriptional regulator PhoB, winged helix family |
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| Protein accession | YP_002944209 |
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| Protein GI | 239815299 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAC CCCGAGTCCT GATCGTCGAA GACGAGTCCT CGATCGCCGA GCTGATCGCC
GTCAACCTGC GCCACAACGG CTTCGAGCCG ATCTGGTCGG AAGACGGCGC GGCAGCGCAA
CGCGAGATCG ACGCCTTCCT GCCGGACCTG ATCCTGCTCG ACTGGATGCT GCCCGGCCAG
AGCGGCCTGC AACTCGCGCG CCAGTGGCGC AAGGACCCGC GCACCAAGGC CATCCCGATC
CTGATGCTCA CCGCGCGCGG CGACGAGCCC GACAAGGTGG CCGGCCTCGA TGCGGGCGCC
GACGACTACA TCACCAAGCC GTTCTCCACC CAGGAAATGC TCGCGCGCAT CCGCGCCGTG
CTGCGCCGCC GCGCGCCCGA GGTGGTGACC GAGCGCGTGG AGATCGGCGA GCTCGCGCTC
GACACCGCCA CGCACCGCGT CACCTGGCAG GGCAATGCGC TCAAGGTGGG GCCGACCGAG
TTCAAGCTGC TGGCCTACCT GATGCAGCAC GCCGAGCGCG TGCACAGCCG GGCGCAACTG
CTCGACAAGG TCTGGGGCGA CCACGTCTAC ATCGAGGAAC GCACGGTCGA CGTGCACGTC
AAGCGCCTGC GCGAATCGCT GGGTGCCGCC TCGCCGATGG TCGAGACGGT GCGCGGCGCG
GGTTACCGCC TGACGGCCCA AGTCACGGTT TGA
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| Protein sequence | MKKPRVLIVE DESSIAELIA VNLRHNGFEP IWSEDGAAAQ REIDAFLPDL ILLDWMLPGQ
SGLQLARQWR KDPRTKAIPI LMLTARGDEP DKVAGLDAGA DDYITKPFST QEMLARIRAV
LRRRAPEVVT ERVEIGELAL DTATHRVTWQ GNALKVGPTE FKLLAYLMQH AERVHSRAQL
LDKVWGDHVY IEERTVDVHV KRLRESLGAA SPMVETVRGA GYRLTAQVTV
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