| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2304 |
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| Symbol | |
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| ID | 7971161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2461594 |
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| End bp | 2463312 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792886 |
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| Product | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_002944197 |
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| Protein GI | 239815287 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.095773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAATG CGGTGGGTCG CGACATGGAG TTTTCTCAAA TGGCCACAGC CGCAAGCAGC
AATTTCGACA ACCGCCTCCA CCAGACCTTT CCCGTCCTGA GCGATACCGA AATCGCGCGC
ATCGCGCACT TCGGCACCGT GCAGCGCTTC GCCCGCGGGG AGCGGCTGTT CACCGCCGGC
GAAACGGGCC CCGGCATGTT CGTTCTGCTC AAGGGCGTGG TGGCGGTCAC GCAGCGCGAC
GGGCTCGGGC ACGTGGTGCC CATCGTGCGC CAGGGCCCGG GCGAGTTCCT TGCCGAAGTC
GGCCAGCTGA GCGGCCGCCC TGCCCTGGTC GACGGCCATG CCGAGGAAGA AGTGGAAGCG
CTGATCGTGC CGCCCGCGCA GCTGCGCGCG CTGCTGGTGG CCGAAGCCGA CCTTGGCGAG
CGCATCACCC GCGCGCTGAT CCTGCGGCGC GTGGCGCTGA TCGAATCCGG CGCCAGCGGG
CCGGTGCTGA TCGGCCGGCC GGAGTCGCCC GACATGGCGC GCCTGGAAAA TTTCCTGCGC
CGCAACGGGC ACCCCTACCA CCTGGTCGAC GCGGCCGAAG ACCCCGGCGC CGCCGCGCTG
CTGGAGCAGT ACGGCACCTG CAAGCTGCTG GCCGTGTGCC CCGACGGCTC GGTGCTGGTC
AACCCCGCCG AAGACGCGCT GGCCCGTTGC CTGGGCATGG TCGATACCGC GGAGCACAAC
GAGCTGTTCG ACGTGGCGGT GGTCGGGGCC GGCCCGGCCG GCCTCGCGAC CGCGGTGTAT
GCCGCCTCCG AAGGGCTGCG CGTGATCGTG CTCGACTGCC GCGCCTTCGG CGGGCAGGCC
GGCGCGAGCG CGCGCATCGA GAACTACCTG GGCTTTCCCA CCGGCATCTC GGGCCAGGCG
CTCGCGGGCC GGGCCTTCGT GCAGGCCCAG AAGTTCGGTG TCGAGATGCT GATCCCGGCC
AAGGTGACGT CGCTCGATTG CTCGCGCGAC AACCCCATGG ACGCGCTGCG CATCGCACTG
GCCGACGGCC GCGCCATCAA CGCGCGCACG GTGGTGATTG CCAGCGGCGC ACGCTACCGG
CGGCCCGACG TGCCGAGGCT GTCCGAGTTC GAGGGCCGCG GCATCTGGTA CTGGGCCTCG
GCCATCGAGG CCAAGCTCTG CGCGCAGCAG GAGGTTGCGC TGGTCGGCGG CGGCAACTCG
GCCGGACAGG CCGCGGTGTT CCTGTCGCGC CATGCGGCCA AGGTCAACGT GCTGGTGCGC
GGGCCGTCGC TCGCGGCCAG CATGTCGCGC TACCTGATCG ACCGCATCGA GGCCACGCCC
AACATCGAAC TGCATCCGCA TACCCAACTG GTGAAGCTCA ACGGCGATTC CGGCGAAGGA
CTGACCGGTG CAACCTGGCG CTGCCAGACC ACGGGCAACG AGCACGACTG CGATGCGCGC
AACATCTTCC TCTTCGTGGG CGCCGAGCCC GAGACCAGCT GGCTCGACGG CTGCGGCGTC
TCGGTCGACA AGCATGGCTT CGTGCTGACG GGCGATGCGG CCAGCAGCGG CTTTCCGGCC
CGGCCCTCCA CTGCGCTGGA ATCCAGCGTG CAGGGCGTCT TTGCCGTGGG CGACGTGCGC
TCGGGTTCGG TCAAGCGCGT GGGCGGTGCC ATCGGCGAAG GCGCGGCCGT GGTCGCGCTG
ATCCACCAGC ACCTGTCGTC CAACTCGGCC GTTGCATGA
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| Protein sequence | MSNAVGRDME FSQMATAASS NFDNRLHQTF PVLSDTEIAR IAHFGTVQRF ARGERLFTAG
ETGPGMFVLL KGVVAVTQRD GLGHVVPIVR QGPGEFLAEV GQLSGRPALV DGHAEEEVEA
LIVPPAQLRA LLVAEADLGE RITRALILRR VALIESGASG PVLIGRPESP DMARLENFLR
RNGHPYHLVD AAEDPGAAAL LEQYGTCKLL AVCPDGSVLV NPAEDALARC LGMVDTAEHN
ELFDVAVVGA GPAGLATAVY AASEGLRVIV LDCRAFGGQA GASARIENYL GFPTGISGQA
LAGRAFVQAQ KFGVEMLIPA KVTSLDCSRD NPMDALRIAL ADGRAINART VVIASGARYR
RPDVPRLSEF EGRGIWYWAS AIEAKLCAQQ EVALVGGGNS AGQAAVFLSR HAAKVNVLVR
GPSLAASMSR YLIDRIEATP NIELHPHTQL VKLNGDSGEG LTGATWRCQT TGNEHDCDAR
NIFLFVGAEP ETSWLDGCGV SVDKHGFVLT GDAASSGFPA RPSTALESSV QGVFAVGDVR
SGSVKRVGGA IGEGAAVVAL IHQHLSSNSA VA
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