| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2254 |
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| Symbol | |
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| ID | 7969968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2399769 |
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| End bp | 2400173 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644792838 |
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| Product | protein of unknown function DUF1486 |
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| Protein accession | YP_002944151 |
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| Protein GI | 239815241 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5485] Predicted ester cyclase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.416383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGGCAA CAGAGATCGA ACACTTTTAC CTCGCGTATA TAGCTTGTCT GAATGCGCAA
GATTGGTCTC GCCTTGCCGA CTTCGTTGAG GTCGATGTGC GTCACAACGA CCGCCCGCTC
GGTGTGGCGG GCTATCGGGT GATGCTTCAA AACGACTTCG CAAATATTCC TGACCTTCGC
TACGAGGTTG AGCTATTCGT CGTCAATACA AACTGCGTGG GGAGCCGACT TCGATTCGAC
TGCTCGCCTC GAGGCAAGTT CTTGGGTCTG CCCGTCAACG GCAAGAGGGT CGTATTTTCG
GAGAACGTGT TCTACGAACT TCGCGATGAC AAGATCGCTC GGGTCTGGTC CGTCGTTGAC
AAGGCAGCAA TTGAAGCGCA GCTTTTAGAA GCTCGAAGTC AATGA
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| Protein sequence | MQATEIEHFY LAYIACLNAQ DWSRLADFVE VDVRHNDRPL GVAGYRVMLQ NDFANIPDLR
YEVELFVVNT NCVGSRLRFD CSPRGKFLGL PVNGKRVVFS ENVFYELRDD KIARVWSVVD
KAAIEAQLLE ARSQ
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