| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2216 |
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| Symbol | |
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| ID | 7969930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2362339 |
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| End bp | 2363250 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792804 |
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| Product | ribonuclease BN |
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| Protein accession | YP_002944117 |
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| Protein GI | 239815207 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.987558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATCC GCGCGCTCTT CGATCTCTGC AAGCAGGCCG TGGCCTCCTG GTCCAACGAC
TACGCTCCGA GCATGGGTGC CGCGCTGGCC TACTACACGG TGTTCTCGAT CGCGCCGCTG
CTCCTGATCG TGATCTCGGT GGCCGGCCTG GTGTTCGGCC AGGAGGCCGC GCGCGGCGAG
ATCTTCGCGC AGCTTTCCGG CCTCATGGGC GCGCAGGGCG CGGCCGCGGT GCAGGGCATG
CTGCAGGCGG TCAACAAGCC GGCCGAAGGC ATCGTGGCCA CGGTGGTGGG CCTGGGCCTG
CTGGTGGTCG GCGCGACCAC CGTCTTCGGC GAACTGCAGG ATGCGCTCGA CCGCATCTGG
CGGGCGCCGG CGCGCACCAA GAGCAAGGGC CTGTTCAACC TGCTGCGCGT GCGGCTGCTG
TCGTTCAGCA TGATCATGGC CATCGGCTTC CTGCTGATGG TGTCGCTGGT GGCCAGTGCG
GCGCTGGCGG CGCTCAGCAA GTGGTGGGCG CCGGTGTTCG GCGGCTGGGC CACGCTGGCG
CAGGCGGTGA ATTTCGTCTT CAGCTTTGCG ATGGTGACGG TGATCTTCGC GATGATCTAC
AAGATCATGC CGCGCGTCAG GGTGCAGTGG CGCGACGTGT GGGTGGGCGC GGCGGTCACG
GCGCTGCTGT TCACCATCGG CAAGCACCTG ATCGGCCTGT ACATCGGCAA GAGCAGCGTG
GCCTCGGGCT ACGGTGCGGC AGGTTCGCTG GTGGTGGTGC TGGTGTGGGT GTACTACTCG
GCGCAGATCT TCCTGCTCGG GGCCGAGTTC ACCTGGGTCT ATGCCAAGAC CTATGGCTCG
CTCAAGAACA TGGGGCGCAG CGCCGACGCG AATCCTTCGC CGACGCGCTC GGACCCGCTG
CCGCAGCGCT AG
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| Protein sequence | MQIRALFDLC KQAVASWSND YAPSMGAALA YYTVFSIAPL LLIVISVAGL VFGQEAARGE
IFAQLSGLMG AQGAAAVQGM LQAVNKPAEG IVATVVGLGL LVVGATTVFG ELQDALDRIW
RAPARTKSKG LFNLLRVRLL SFSMIMAIGF LLMVSLVASA ALAALSKWWA PVFGGWATLA
QAVNFVFSFA MVTVIFAMIY KIMPRVRVQW RDVWVGAAVT ALLFTIGKHL IGLYIGKSSV
ASGYGAAGSL VVVLVWVYYS AQIFLLGAEF TWVYAKTYGS LKNMGRSADA NPSPTRSDPL
PQR
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