Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2184 |
Symbol | |
ID | 7973871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2334980 |
End bp | 2336128 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644792772 |
Product | radical SAM enzyme, Cfr family |
Protein accession | YP_002944085 |
Protein GI | 239815175 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCACGG CCAACCTGCT CGAATTCGAT CTCGAGGGGC TGGCTGCGTT CTGCGAAAAG CTCGGCGAGA AGCGATTCCG CGCCACGCAG CTGTTCCGCT GGATCCACCA GCGTGGCGCC AGCGACTTCG CCCAGATGAC CGATCTGGCC AAGTCGCTGC GCGAGAAGCT CGCCACCACC GCTCGCGTCG AGGCCCTGCC GGTCATCACG CAGCACGAAT CCAAGGACGG CACGATCAAG TGGCTGTTCG ACGTCGGCGA CGGCAATGCC GTCGAAGCCG TATTCATTCC CGAAGACGAC CGCGGCACGC TGTGCGTGTC GTCCCAGGCC GGCTGCGCCG TGGGTTGCCG CTTCTGCTCC ACGGGGCACC AGGGCTTCAG CCGCAACCTG AGCACGGGCG AGATCGTCGC CCAGCTCTGG TTTGCCGAAC ACTTCCTGCG CAAGCACCTG AAACGCGACG AGCGCGTCAT CTCCAACGTG GTGATGATGG GCATGGGCGA GCCGCTGCAG AACTACACCG CGCTGGTGCC GGCGCTGCGC ACCATGCTCG ACGACAACGC CTACGGCCTG TCGCGCCGCC GCGTGACCGT GTCGACCTCC GGCGTGGTGC CGATGATCGA CCGCCTGGGC GCCGACTGCC CGGTGGCCAT GGCCGTGTCG CTGCATGCGC CCAACGATGC GCTGCGCGAC GACCTCGTGC CGCTCAACCG CAAGTACCCG ATTGCCGAGC TGCTCGAGGC CTGCAAGCGC TACCTGGTGC ATGCGCCGCG CGACTTCATC ACCTTCGAGT ACTGCATGCT CGATGGCGTC AACGACCAGC CCGAGCATGC GCGGCAGCTG GTTGAACTCG TTCGCACCCA TGGCGTGTCG TGCAAGTTCA ACCTGATTCC GTTCAATCCG TTTCCGGCCT CGGGCCTCTT GCGTTCGCCG CAGCCGCGGG TGCTGGCCTT TGCCAAGGCA CTGAGCGAGG CCGGCCTCGT GACCACCGTG CGCAAGACGC GCGGCGACGA CATCGATGCG GCCTGCGGAC AGCTGGCCGG CGACGTCAAG GACCGTACCC GCGCGGCCGA ACGCATGGCC CAGCGCCGTG TGGGCGAGCG CACCGTTGTT CTGCATCCGG TTCGCAAGAC CGCCCCCCAG GAGCATTGA
|
Protein sequence | MTTANLLEFD LEGLAAFCEK LGEKRFRATQ LFRWIHQRGA SDFAQMTDLA KSLREKLATT ARVEALPVIT QHESKDGTIK WLFDVGDGNA VEAVFIPEDD RGTLCVSSQA GCAVGCRFCS TGHQGFSRNL STGEIVAQLW FAEHFLRKHL KRDERVISNV VMMGMGEPLQ NYTALVPALR TMLDDNAYGL SRRRVTVSTS GVVPMIDRLG ADCPVAMAVS LHAPNDALRD DLVPLNRKYP IAELLEACKR YLVHAPRDFI TFEYCMLDGV NDQPEHARQL VELVRTHGVS CKFNLIPFNP FPASGLLRSP QPRVLAFAKA LSEAGLVTTV RKTRGDDIDA ACGQLAGDVK DRTRAAERMA QRRVGERTVV LHPVRKTAPQ EH
|
| |