Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2173 |
Symbol | |
ID | 7973860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2323328 |
End bp | 2324758 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644792761 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_002944074 |
Protein GI | 239815164 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.305369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAACA AACAATTCGA CGTCATCGTC ATCGGCGGCG GCCCCGGCGG CTACATCGCC GCGATCCGCG CGGCGCAGCT GGGCTTCAAC GTGGCCTGCA TCGACGAGTG GAAGAACGGC AAGGGCGGCC CCGCACCGGG CGGCACCTGC ACCAACGTCG GCTGCATTCC ATCGAAGGCG CTGCTGCAAT CGTCGGAGCA CTTCGACCAG GCCGGCCACC ACTTTGCCGA CCACGGCATC AAGGTCGAAG GCCTGGGGCT GGACCTCGAC AAGATGCTGG CCCGCAAGGA CCAGGTCGTG AAGCAGAACA ACGACGGCAT CCTGTATCTG TTCAAGAAGA ACAAGATCAC CTTCTTCCAT GGCCGCGGCT CGTTCGTGAA GGCGGGCGAA GCCGGCTACG AGATCAAGGT GGCGGGCGCT GCCGAAGAGT CGATCGAGGG CAAGCACATC ATCGTGGCCA CGGGCTCCAA CGCCCGCGCG CTTCCGGGCG CGCCGTTCGA CGAGGAGAAC ATCCTCTCGA ACGACGGCGC GCTGCGCATC GGCGCGGTGC CCAAGAAGCT GGGCCTGATC GGCTCGGGCG TCATCGGGCT TGAAATGGGT TCTGTGTGGC GCCGCCTCGG CGCCGAAGTC ACGGTGCTCG AAGCGCTGCC GACCTTCCTC GGCGCGGTCG ACGAGCAGAT CGCCAAGGAA GCCAAGAAGG CCTTCGACAA GCAGAAGCTC AAGATCGAAC TCGGCGTGAA GGTCGGCGAG ATCAAGTCGT CCAAGAAGGG CGTGAGCGTG GCCTGGACCA ACGCCAAGGG CGAAGCCCAG ACGCTGGAGG TCGACAAGCT GATCGTCTCG ATCGGCCGCG TGCCCAACAC CATCGGCCTG AACGCCGAAG CCGTGGGCCT GAAGCTCGAC GAGCGCGGCG CCATCGCCGT GGACGACGAC TGCAAGACCA GCCTGCCCAA CGTCTGGGCC ATCGGCGACG TGGTGCGCGG CCCGATGCTC GCGCACAAGG CCGAGGAAGA GGGCGTTGCC GTGGCGGAGC GCATTGCGGG CCAGCACGGC CACGTCAACT TCAACACCGT GCCGTGGGTG ATCTACACCA ACCCCGAGAT CGCATGGGTC GGCCAGACCG AGCAGCAGCT CAAGGCCGCG GGCCGCGCCT ACAAGGCCGG CACCTTCCCG TTCCTCGCGA ACGGCCGCGC ACGCGCGCTG GGCGACACGA CCGGCATGGT CAAGTTCCTG GCCGACGCGG CCACGGACGA GATCCTGGGC GTGCACATCG TGGGCCCGCA GGCCAGCGAG TTGATCTCCG AAGCCGTGGT GGCGATGGAG TTCAAGGCCA GCGCCGAAGA CATCGCGCGC ATCTGCCATG CGCACCCGTC GCTGTCGGAA GCCACGAAGG AAGCGGCACT TGCCGTGGAC AAGCGCACGC TGAACTTCTG A
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Protein sequence | MANKQFDVIV IGGGPGGYIA AIRAAQLGFN VACIDEWKNG KGGPAPGGTC TNVGCIPSKA LLQSSEHFDQ AGHHFADHGI KVEGLGLDLD KMLARKDQVV KQNNDGILYL FKKNKITFFH GRGSFVKAGE AGYEIKVAGA AEESIEGKHI IVATGSNARA LPGAPFDEEN ILSNDGALRI GAVPKKLGLI GSGVIGLEMG SVWRRLGAEV TVLEALPTFL GAVDEQIAKE AKKAFDKQKL KIELGVKVGE IKSSKKGVSV AWTNAKGEAQ TLEVDKLIVS IGRVPNTIGL NAEAVGLKLD ERGAIAVDDD CKTSLPNVWA IGDVVRGPML AHKAEEEGVA VAERIAGQHG HVNFNTVPWV IYTNPEIAWV GQTEQQLKAA GRAYKAGTFP FLANGRARAL GDTTGMVKFL ADAATDEILG VHIVGPQASE LISEAVVAME FKASAEDIAR ICHAHPSLSE ATKEAALAVD KRTLNF
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