| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2172 |
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| Symbol | |
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| ID | 7973859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2322054 |
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| End bp | 2323313 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792760 |
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| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
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| Protein accession | YP_002944073 |
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| Protein GI | 239815163 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.042152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATCG TAGAAGTCAA AGTCCCCCAG CTTTCCGAAT CCGTGGCCGA AGCCACCATG
CTCACCTGGA AGAAGAAGGC CGGCGAAGCC GTCGCCGTCG ATGAAATCCT GATCGAGATC
GAGACCGACA AGGTCGTGCT CGAGGTGCCC GCGCCCTCGG CTGGCGTGCT GGCCGAGATC
GTGCAGCCCG ATGGCGCCAC CGTGGTGGCC GACCAGCTGA TCGCGAAGAT CGACACCGAA
GGCAAGGCAA GCGCTGCAGC GCCTGCAGCA GCGGCACCCG CCGCCGCACC GGCCCCGGCA
GCTGCGCCCG CAGCGGCTGC GGCCGCCACC GGCGGTTCGA AGTCCGACGT TGCCATGCCC
GCCGCCGCCA AGCTGCTGGC CGACAACAAC CTGAAGACCA GCGACGTGGC CGGCAGCGGC
AAGGACGGCC GCGTCACCAA GGGCGACGTG CTCGGCGCCG TGGCTTCGGG CGCCAAGCCC
GCGCCCGCCG TGGCTGCACC GGCCGCCAAG CCCGCGCTGC CGCAAGTCGC CGCGCCCGCG
GGTGCGCCCG ACCTGGGCGA GCGCCCCGAG CAGCGCGTGC CGATGAGCCG CCTGCGCGCC
CGCATCGCCG AGCGCCTGAT CCAGTCGCAA TCGACCAACG CGATCCTGAC GACCTTCAAT
GAAGTCAACA TGGCGCCCGT CATGGAGCTG CGCAAGCGCT TCCAGGACAG CTTCACCAAG
GAGCATGGCG TGAAGCTCGG CTTCATGAGC TTCTTCGTGA AGGCCGCGGT GCATGCGCTC
AAGAAGTACC CGGTGATCAA CGCCTCGGTC GACGGCAACG ACATCCTGTA CCACGGCTAC
TTCGACATCG GCATTGCCGT CGGTTCGCCG CGCGGCCTGG TGGTGCCGAT CCTGCGCAAC
GCCGACCAGA TGAGCTTTGC CGACATCGAG AAGAAGATCG CCGAATACGG CAAGAAGGCA
CAGGACGGCA AGCTCGGCAT CGAAGAGATG ACCGGCGGCA CCTTCTCCAT CTCGAACGGC
GGCACCTTCG GCTCGATGCT CTCGACGCCG ATCATCAACC CGCCCCAGTC GGCCATCCTC
GGCGTGCACG CCACCAAGGA CCGCGCCGTG GTCGAGAACG GCCAGATCGT GGTTCGCCCG
ATGAACTACC TTGCCATGAG CTACGACCAC CGCATCATCG ACGGCCGCGA AGCCGTGCTG
GGCCTGGTGG CCATGAAGGA AGCGCTCGAA GACCCGTCGC GCCTGCTGTT CGACATCTGA
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| Protein sequence | MSIVEVKVPQ LSESVAEATM LTWKKKAGEA VAVDEILIEI ETDKVVLEVP APSAGVLAEI
VQPDGATVVA DQLIAKIDTE GKASAAAPAA AAPAAAPAPA AAPAAAAAAT GGSKSDVAMP
AAAKLLADNN LKTSDVAGSG KDGRVTKGDV LGAVASGAKP APAVAAPAAK PALPQVAAPA
GAPDLGERPE QRVPMSRLRA RIAERLIQSQ STNAILTTFN EVNMAPVMEL RKRFQDSFTK
EHGVKLGFMS FFVKAAVHAL KKYPVINASV DGNDILYHGY FDIGIAVGSP RGLVVPILRN
ADQMSFADIE KKIAEYGKKA QDGKLGIEEM TGGTFSISNG GTFGSMLSTP IINPPQSAIL
GVHATKDRAV VENGQIVVRP MNYLAMSYDH RIIDGREAVL GLVAMKEALE DPSRLLFDI
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