Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2167 |
Symbol | |
ID | 7973854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2314312 |
End bp | 2315394 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644792755 |
Product | glucose sorbosone dehydrogenase |
Protein accession | YP_002944068 |
Protein GI | 239815158 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGGCT TGGCCGTCTG GGGTGCCGCC ATGGCGCAGA TACGGCCGGA AACCATTTCG GCCGGCCTCG AGAACCCATG GGGGGTGGCT TTTCTGCCGG GCGGCCGTTT CGTGGTCACG GAGCGGGCCG GGCGGTTGCG GCTGATCGCT GCGGACGGCA AGATCGGCGC GCCCATCACT GGCCTGCCCC CCATTGCGGC CGGCGGCCAG GGCGGCTTGC TCGACGTGCT GGCCGATTCG GGCTTCGACA AGAACCGCAC ACTGTATTTC TGCTTCTCGG AACCCGCAGC CGGTGGTGGT TCGGGCAACG GCACGGCACT GGCCAGCACG CAGCTTTCGG CCGACGGCAC GCGGCTGGAG AACCTCAAAA TCATCTTCAG CCAGCAGCCC AAGGTGGCCA GCCGCAACCA TTTCGGCTGC CGCATCGTCG AGGCGCGCGA CGGCACGCTG TTTCTCACGC TGGGCGAACG GTTCAGCCGC AAGGAGGATG CGCAGAAGCT CGACAACCAC CTGGGCAAGG TGGTGCGCAT CGCCAAGGAC GGCTCGGCGC CCAAGGACAA TCCCTTTGTC GGCCGGGCGG GTGCGCTGCC CGAGATCTGG AGCTATGGCC ACCGCAACGG ACAGGGCGCG GTGCTCGGGC CCGATGGCCG CTTATGGATG ACGGAGCACG GCCCGCAGGG CGGCGACGAA ATCAATATCC CGCAAGCCGG CCGCAACTAC GGCTGGCCGG TGATCACCTA CGGCGAGAAC TATGGCGGCG GAAAGATCGG CGAGGGCATC ACGGCGAGGG ACGGCATGGA ACAGCCGCTG CACTACTGGG TGCCGTCGAT CGCGCCCTCG GGCATGGCTT TCCTCACCAG CGACCGCTAT GGCGCGGGCT GGAAGGGCAA CCTGTTCGTG GGCTCGCTCA AGTTCGGCTA TCTCGACCGC ATCGAGCTGA AGGACGGCAA GGTGGTGGCC GAGCACAAGC TGCTGGCCGA CGACCGGGCC CGCATTCGCG ATGTGAAGCA GGGGCCGGAC GGCCTGCTCT ACGTGCTGAC CGACGAATCC GACGGCAAGC TGCTGCGCCT GCGGCCGAAC TGA
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Protein sequence | MAGLAVWGAA MAQIRPETIS AGLENPWGVA FLPGGRFVVT ERAGRLRLIA ADGKIGAPIT GLPPIAAGGQ GGLLDVLADS GFDKNRTLYF CFSEPAAGGG SGNGTALAST QLSADGTRLE NLKIIFSQQP KVASRNHFGC RIVEARDGTL FLTLGERFSR KEDAQKLDNH LGKVVRIAKD GSAPKDNPFV GRAGALPEIW SYGHRNGQGA VLGPDGRLWM TEHGPQGGDE INIPQAGRNY GWPVITYGEN YGGGKIGEGI TARDGMEQPL HYWVPSIAPS GMAFLTSDRY GAGWKGNLFV GSLKFGYLDR IELKDGKVVA EHKLLADDRA RIRDVKQGPD GLLYVLTDES DGKLLRLRPN
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