| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2103 |
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| Symbol | |
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| ID | 7972505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2245561 |
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| End bp | 2246334 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644792692 |
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| Product | ABC transporter related |
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| Protein accession | YP_002944006 |
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| Protein GI | 239815096 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAG ACACCATCCT CGACGTCCGC GGAATTTCCA AGCGCTTCGG TGGCCTGCAA
GCGCTTTCGG ATGTGGGCAT CACCATCAAG CGCGGCCAGG TCTATGGCCT CATCGGCCCC
AACGGCGCCG GCAAGACCAC CTTCTTCAAT GTGATCACCG GGCTCTACAC GCCCGACAGC
GGCAGCTTCG AGCTGGCCGG CAAACCCTAC CAGCCCACGG CCGTGCATGA AGTGGCCAAG
GCGGGCATTG CGCGCACCTT CCAGAACATC CGCCTGTTCT CCGAAATGAC CGCGCTCGAA
AACGTGATGG TCGGGCGACA CATCCGCACG CATTCGGGCG TGTTCGGTGC CATGCTGCGC
ACCGGTTCGT TCAAGGCCGA GGAAAAGGCC ATTGCCGAAC GCGCACAGGA GCTGCTCGAC
TACGTGGGCA TCGGCAAGTT CGCCGACTAC AAGGCCCGCA CCCTGTCGTA CGGCGACCAG
CGCCGGCTCG AGATCGCGCG CGCACTGGCC ACCGATCCGC AGCTCATCGC GCTGGACGAG
CCCGCCGCCG GCATGAACTC GACCGAGAAA GTGCTGCTGC GCGAACTGAT CGACCGGATC
CGCAAGGACG ACCGGACCAT TCTCATCATC GAACACGACG TCAAGCTCAT CATGGGCCTG
TGCGACCGCG TCACCGTGCT CGACTACGGC AAGCAGATCG CCGAAGGCAC ACCGTATGAC
GTGCAAAAGA ACGAGAAGGT GATCGAAGCC TATCTCGGCA CCGGAGGACA CTGA
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| Protein sequence | MTTDTILDVR GISKRFGGLQ ALSDVGITIK RGQVYGLIGP NGAGKTTFFN VITGLYTPDS
GSFELAGKPY QPTAVHEVAK AGIARTFQNI RLFSEMTALE NVMVGRHIRT HSGVFGAMLR
TGSFKAEEKA IAERAQELLD YVGIGKFADY KARTLSYGDQ RRLEIARALA TDPQLIALDE
PAAGMNSTEK VLLRELIDRI RKDDRTILII EHDVKLIMGL CDRVTVLDYG KQIAEGTPYD
VQKNEKVIEA YLGTGGH
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