Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2088 |
Symbol | |
ID | 7972490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2231402 |
End bp | 2231665 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644792678 |
Product | hypothetical protein |
Protein accession | YP_002943992 |
Protein GI | 239815082 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTCGC GAGCGACATC CGCATCGCCG AAGCGGGCGC CGATCGGCCG CAGGCCGGCT GCCGATCCGG CGTCGGCCTG GGTGCGACGG GCCGACGAAC CGGCGGCCGC AGTCAAGGCA TCGATCTACA CCGCGCGTCT GACCATCGAC GTGACGCCCG CGCTGCGTGG ACACATCAAG GTCGTCGCGT TCAAGCGCGG CATGACCGCG GCCGAGATGC TGCGCGAGCT GCTGGAGCGA GAGTACGGCG GAGGTGAACC GTGA
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Protein sequence | MTSRATSASP KRAPIGRRPA ADPASAWVRR ADEPAAAVKA SIYTARLTID VTPALRGHIK VVAFKRGMTA AEMLRELLER EYGGGEP
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