Gene Vapar_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2088 
Symbol 
ID7972490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2231402 
End bp2231665 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content70% 
IMG OID644792678 
Producthypothetical protein 
Protein accessionYP_002943992 
Protein GI239815082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCGC GAGCGACATC CGCATCGCCG AAGCGGGCGC CGATCGGCCG CAGGCCGGCT 
GCCGATCCGG CGTCGGCCTG GGTGCGACGG GCCGACGAAC CGGCGGCCGC AGTCAAGGCA
TCGATCTACA CCGCGCGTCT GACCATCGAC GTGACGCCCG CGCTGCGTGG ACACATCAAG
GTCGTCGCGT TCAAGCGCGG CATGACCGCG GCCGAGATGC TGCGCGAGCT GCTGGAGCGA
GAGTACGGCG GAGGTGAACC GTGA
 
Protein sequence
MTSRATSASP KRAPIGRRPA ADPASAWVRR ADEPAAAVKA SIYTARLTID VTPALRGHIK 
VVAFKRGMTA AEMLRELLER EYGGGEP