| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2067 |
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| Symbol | |
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| ID | 7972469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2209816 |
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| End bp | 2211234 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792660 |
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| Product | PepSY-associated TM helix domain protein |
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| Protein accession | YP_002943974 |
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| Protein GI | 239815064 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAC AAGCCTTGCC GCGCCAGACG GCACCCTTCG TTGCCGGCAG CCTCTACCGC
GCCGTGTGGC GCTGGCATTT CTATGCCGGT CTGCTCGTGC TGCCGTTCCT GATCTGGCTC
GCGCTGACCG GCGGTCTGTT CGTCTTCAAG CTGCAGATCG ACGGGTATTT TCACCACGAT
CTGAAGTTCG TGCAGGCGAG GCAGGGACCC GCGTTGGCGC ACAGCGAACT GGTCGGGGCC
GCACTGGCGG CCCACCCCGG CACGCTGCGC AAGTACACGC CGGCGGCCTC GACGGGCGAT
TCGGCGGAGG TGGGTATTGC CAGTGCGAGC GGTGAACAGC TCGTCGTGTT CGTCGACCCC
TATCGCGCAA AGGTGCTGGG TACGCTACCC GAGGGCGGGA GCGTGGCCTG GACCATCCGC
AAGCTGCACA GCCTCAAGTA CTTCGGGTCG GTGGCGCGCG GTGCCATCGA GATCGCGGCC
GGGTGGGCGA TCCTGCTGGT GACGACCGGC ATCTACCTCT GGTGGCCGCG TGGGCGCCGT
GGCGGCGTGG TCACGGTGCG CGGGCGACCT CGCCAACGCG TGTTCTGGCG CGACCTGCAT
GCGGTGACGG GCATCTTCGT CGGCGCCGCG CTGGTGTTCC TGGCGTTCAC CGGCATGCCG
TGGTCGGTGT TCTGGGGCGC CAAGGTCAAC CAGTGGGCCA ATGGGCAGAA CTTCGGCTAT
CCATCGGGTG TGCGCGTGCA GATGCCGATG TCGCAGCAGC GCTTGGCAGA CGGGGCGCCC
ACGGCGTGGT CGCTCGAACA GGCAAAGGTT CCGCGCTCGA GTCACGAGGG GCATGAAGGC
CATGAGGGAC ATGCAGAGCC TGGCACGGTC ATGCATCCCG TGGCTGCCGA GGGCGCCCTC
GGTCTCGATG CCGCGATCAG GATCTTCGAG CGGCTCGGCA TTGCCCGGGG CTACACCGTG
AACCCGCCCC AGGGTTCGAG CGGCGTCTAC ACGGCCTCAG CCTGTCCGAG CGACCTCGCG
CAGCAGCGAG TGATCCACAT CGACCAGTAC AGCGGCAAGA CGCTGATCGA CATGCGCTAC
GCGGACTACG GCCCGGTCGC GCGGTGGCTT GAATGGGGCA TCAACGTTCA CCTGGGCCAG
GAGTTCGGCG TTCCCAACCA GGCGGTGCTC GTGGCGGTTT GCGTGGGCAT CGTGCTGCTG
TGCGTCAGTG CCACGACCAT GTGGTGGAAG CGACGGCCCG CAGGTGGGCT CGGCGTGCCG
CCGCTGCCCT CGGACCGGCG CACGCTGTGC GTTGTGCTGG CAATGCTGGC GCTGGGCGGC
ATCGCCTTTC CACTGGTGGG TGCATCCCTG CTGGTCATGC TGGCGGTGGA CATGTGGATA
AGCGGCAGGG CTTCCAGTGC AGGACGCTCG CCAGCCTGA
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| Protein sequence | MTAQALPRQT APFVAGSLYR AVWRWHFYAG LLVLPFLIWL ALTGGLFVFK LQIDGYFHHD
LKFVQARQGP ALAHSELVGA ALAAHPGTLR KYTPAASTGD SAEVGIASAS GEQLVVFVDP
YRAKVLGTLP EGGSVAWTIR KLHSLKYFGS VARGAIEIAA GWAILLVTTG IYLWWPRGRR
GGVVTVRGRP RQRVFWRDLH AVTGIFVGAA LVFLAFTGMP WSVFWGAKVN QWANGQNFGY
PSGVRVQMPM SQQRLADGAP TAWSLEQAKV PRSSHEGHEG HEGHAEPGTV MHPVAAEGAL
GLDAAIRIFE RLGIARGYTV NPPQGSSGVY TASACPSDLA QQRVIHIDQY SGKTLIDMRY
ADYGPVARWL EWGINVHLGQ EFGVPNQAVL VAVCVGIVLL CVSATTMWWK RRPAGGLGVP
PLPSDRRTLC VVLAMLALGG IAFPLVGASL LVMLAVDMWI SGRASSAGRS PA
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