| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1989 |
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| Symbol | |
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| ID | 7969782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2136840 |
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| End bp | 2137178 |
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| Gene Length | 339 bp |
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| Protein Length | 112 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644792587 |
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| Product | PRC-barrel domain protein |
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| Protein accession | YP_002943901 |
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| Protein GI | 239814991 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.128496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGAGCG CCAATCCAGT TATTTCGTCG GATCGTGTCG AGGGGACATC CGTCTACAAC
ACGTCGGGAG ACAAGCTCGG CAGCATCGAT GAACTCATGA TCGACAAGAT CTCGGGCCAG
GTCCGCTATG CCGTGTTGGA GTTCGGCGGC TTCCTGGGCA TGGGCACGGA CCGCTATCCG
CTCCCCTGGT CCATGCTGAA GTACGACACC TCGCAGGACG GCTATGTGGT GCCGTTGACC
AAGGCGCAGA TCGAAGGTGC GCCCAAGTAT GCGAGCGACC GCGTGCCCGA GTACGACGAT
ACGTACAGCG GGACGGTGGA CAAGTACTAC GGGCTTTGA
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| Protein sequence | MVSANPVISS DRVEGTSVYN TSGDKLGSID ELMIDKISGQ VRYAVLEFGG FLGMGTDRYP
LPWSMLKYDT SQDGYVVPLT KAQIEGAPKY ASDRVPEYDD TYSGTVDKYY GL
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