| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1987 |
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| Symbol | |
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| ID | 7969780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2135447 |
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| End bp | 2136010 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644792585 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002943899 |
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| Protein GI | 239814989 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.144245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCGG CGCGCATCGG CGCGCAGGTG AGGGCGCTTC GCATGGCGGC TGAGATGTCG
GCTGGTTCGC TGGCAAAGGC CTCGGGGGTC TCTGCTTCGA TGCTTTCGCG CATCGAGCGT
GGTCTGGTGT CACCGTCGGT GGAGACCTTG GAGCGCGTTG CGCAGGGGTT GCATGTGCCG
GTGTCGCGCT TCTTCGGAGA TCAGGCGCGC CGCACGGACT TCTCTCATGT GCGTGCGGGG
AAGGGCGTTG TTGTCGATCG GGTCGGCGCG GTCAAGGACT ACCGCTACGA ACTGCTGGGG
CACCTCCTTT CGGGCAACCT GTTTGTTGAG CCCTATCTGG TCACGCTGTT GCCCGGTGCC
GATCCCTACG TGACCTTCCA ACACCCGGGC CTCAAGTTCC TGTACTTCCT GTCCGGGGAA
GTGACCTACC GCTACGGTGC CAAGACAGCT GCGGTGAGGG CGGGGGACTC GCTGCTGTTC
GATGCGACCG CGCTGCACGG CATCGAGGTG ATAGAGGTCC AGCCGGTGTC CTACCTGTCA
GTGGTGTTCA CACTGCGCGA GTGA
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| Protein sequence | MSAARIGAQV RALRMAAEMS AGSLAKASGV SASMLSRIER GLVSPSVETL ERVAQGLHVP
VSRFFGDQAR RTDFSHVRAG KGVVVDRVGA VKDYRYELLG HLLSGNLFVE PYLVTLLPGA
DPYVTFQHPG LKFLYFLSGE VTYRYGAKTA AVRAGDSLLF DATALHGIEV IEVQPVSYLS
VVFTLRE
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