Gene Vapar_1918 details

Gene Information

• Locus tag: Vapar_1918
• ID: 7971097
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 2051467
• End bp: 2052063
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644792517
• Product: hypothetical protein
• Protein accession: YP_002943831
• Protein GI: 239814921

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGACCC TCGCCAAACA AGTTATGGAG CACGCCGCCG GGTTGCCGGA AGGCACGCCC 
TTGATCGCGA AAGAACTGCT GCACCTGGGG AATCGCGCCG CCGTGGACCA GGTTCTGTCC 
CGCCTCGTGC AGCGCGGCGC GCTGCTGCGC GCGGGCCGCG GCATCTATGT GCTGCCAGTC 
GAAAGCCGCT TCGGCTCCCG GGCGCCTTCG GCTGCCAGGA TGGTCGAGGC ATTGGCGAGC 
CAGCGCGGAG AAACCATCGT GCCGCATGGT GCGTCTGCCG CCAACGCGCT GGGTCTCACC 
ACGCAGGTAC CTATGCGGGC GGTTTATCTG ACGTCGGGCC CAAGCCGTCG CTTGAAGCTG 
GGAGCACAAA CGGTGGAGTT GCGGCATGCG CCGGTGTGGC AGTTGATCCT TCCAGGCCGC 
GCCGCGGGCG ATGTGGTGCG GGCGCTGGCA TGGCTCGGGC CGGAGAAGGC CGGCAAGGCG 
TTGCGTGCGC TGCGCGCCAA ACTGCCGCCG GCCGAGTTGA AGGAAGTGGC TTCGGCACGC 
GCGCGCCTGC CCACCTGGAT GGCCCAGGAA GTCAGTGCGC TGGTGCCGCA TGGCTGA 

 

Protein sequence

MQTLAKQVME HAAGLPEGTP LIAKELLHLG NRAAVDQVLS RLVQRGALLR AGRGIYVLPV 
ESRFGSRAPS AARMVEALAS QRGETIVPHG ASAANALGLT TQVPMRAVYL TSGPSRRLKL 
GAQTVELRHA PVWQLILPGR AAGDVVRALA WLGPEKAGKA LRALRAKLPP AELKEVASAR 
ARLPTWMAQE VSALVPHG