| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1901 |
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| Symbol | |
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| ID | 7971080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2032452 |
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| End bp | 2033513 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792502 |
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| Product | NMT1/THI5 like domain protein |
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| Protein accession | YP_002943816 |
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| Protein GI | 239814906 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATCG AGACGCCCTC CTCTTCCCAT GCCAGCGCCC CGCCTTCGAG GCGCCTGGCG
CTCAAGACCT TCGCTTCGCT CGCCTCCGTG GCGGCCATCG GCAGCCTCGG GCTTTCGGGC
TGCTCGCGCG AGGCCGGCGG CCCGGCCGTG GTGAAGAAGA CCGGCGACAA GGTGGCGTTC
AAGTACCCGA ACAACCCGTC GTTCGACCTG ATCTACCTGG CCGACGAGCT CGGCTACTTC
GACGGCACCA ACACCCGCCC CGAGTACGTC GGCAAGATCG CCGCGCCGCA GATCATTCCG
CTGGTGGGCA CGGGCGAGAT CGACTTCGGC AGCCGCATGG TGCCGCTGGT GATCTCGGCC
ATTGCGTCGG GCGCGGACCT CAAGGTGGTG GCCGCGGGCG GCAAGACGCT GCAGGAGGCG
CCGCACATGA AGTACTTCGT TCGCAAGGAC TCGGGCATCC GCAACCCGAA GGACCTGGAG
GGCAAGACCA TCGGCTTCAA CAGCTTCGGC GCCTGCGCCG AGTTCGTGAC CAAGAAGTAC
CTGCGCCAGC ACGGCGTGGA CGTGGCGAAG ATCAACTTCG TCGTGGTGCC CGACGAGCAG
GCCGAGCAGA CGCTGGTGAC CGGCAACACC GACCTCGCGA TCATCCACGC GCCTTTCTCG
GGCCGGGCCG ACAACGCCGA GCCCCTGGTG CGGCTGTGGA GCGACTACGA CCTCGACGGC
GGCCTTGGCG GCATGGCGCC GTACAGCGCG CATGGCCAGT TCATCCGCCA GCACCCGGAG
GCAGTGCGCG ACGTGGTGGC GGCGCTCGCC AAGGCCGGCA ACTGGGTCAA TGCCAACACC
GAGGAAGCGC GCAAGCTGGT GGCCAAGCGC ATCAGCATGG ACCTGAAGAA CGTCGACCGC
TACGCCTATG TCGACGACCT GGTGGTGACC GAGCCGCCGA TCCAGTACTA CATCGACATC
CTGCAGTCCG AGGGCAAGCT CGCCGCCGGC AAGGTGGCGG TGAAGGACGT CTACACGAAC
GAGTTCAATC CCTTCGCGCA GCAGCAGGCC GCGAAGTCCT GA
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| Protein sequence | MPIETPSSSH ASAPPSRRLA LKTFASLASV AAIGSLGLSG CSREAGGPAV VKKTGDKVAF
KYPNNPSFDL IYLADELGYF DGTNTRPEYV GKIAAPQIIP LVGTGEIDFG SRMVPLVISA
IASGADLKVV AAGGKTLQEA PHMKYFVRKD SGIRNPKDLE GKTIGFNSFG ACAEFVTKKY
LRQHGVDVAK INFVVVPDEQ AEQTLVTGNT DLAIIHAPFS GRADNAEPLV RLWSDYDLDG
GLGGMAPYSA HGQFIRQHPE AVRDVVAALA KAGNWVNANT EEARKLVAKR ISMDLKNVDR
YAYVDDLVVT EPPIQYYIDI LQSEGKLAAG KVAVKDVYTN EFNPFAQQQA AKS
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