Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1874 |
Symbol | |
ID | 7971052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2005783 |
End bp | 2006859 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644792475 |
Product | phenylalanyl-tRNA synthetase, alpha subunit |
Protein accession | YP_002943790 |
Protein GI | 239814880 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.388089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAGT TGGACTCCCT TGTCGCCACC GCCCGCGCCG CCTTCGCCGA AGCGAAAACG CCCGCCGAGC TCGAAAACGC CAAGGCCCAG TTCCTCGGCA AGTCGGGCCG CATCACCGAG CTGATGAAAG GCATGGCCGC GCTCAGCGTC GACGAGAAGA AGTCGCGCGG CGCTGCCATC AACGTGGCCA AGCAGGCGAT CGAAGCCGCG CTGACCGAAC GCCGCCAGCA GCTCGCCGAC GAAGAGCTTT CGCTGCAGCT GCGCGCCGAG GCGCTCGACG TGAGCCTGCC CGGCCGCCGC CGCATTCCGG GTGGCCTGCA CCCCGTGAGC CGCACGCTGG AGCGCATCGA GGAGATCTTC TCGAGCATGG GCTTCGACGT GGCCGACGGC CCCGAGATCG AGAGCGACTG GCACAGCTTC ACCTCGCTCA ACAACCCGCC GAACCATCCG GCGCGCTCGA TGCAGGACAC CTTCTACGTC GACCTCAACG GCGACGACGG CATTCCGTAC AACCTGCGTC CGCACACCAG CCCGATGCAG GTGCGCTATG CGCATCAGCA CATCAAGAAG TACGCCGCCG AATTCGCGGC GGCCGCGGCC GACGCCACCG GCACCGTCAA GGCGCCCGAG ATCCGCGTGA TTGCGCCGGG CCGCACCTAC CGCGTCGACA GCGACGCCAC GCACTCGCCG ATGTTCCACC AGTGCGAAGG CCTGTGGCTC GGCGAGAACG TGAGCTTCAA GGACCTGAAG GTCGTATTCA CCGACTTCTG CCGCACCTTC TTCGAGAGCG ACGACCTCGT GCTGCGCTTC CGCCCGAGCT TCTTCCCGTT CACCGAGCCC AGCGCCGAGA TCGACATCCA GTTTGCGAGC GGCCCGCTGG CCGGCCGCTG GCTCGAAGTG GCGGGTTCGG GCCAGGTGCA TCCGAACGTG GTGCGCAACA TGGGGCTCGA CCCCGAGCGC TACATCGGCT TTGCCTTTGG CATGGGCCCC GACCGGCTCA CCATGCTGCG CTACGGCGTG AACGACCTGC GGCTGTTCTT CGACGGCGAC TTGCGCTTTC TCTCGCAGTT CCAGTAA
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Protein sequence | MNELDSLVAT ARAAFAEAKT PAELENAKAQ FLGKSGRITE LMKGMAALSV DEKKSRGAAI NVAKQAIEAA LTERRQQLAD EELSLQLRAE ALDVSLPGRR RIPGGLHPVS RTLERIEEIF SSMGFDVADG PEIESDWHSF TSLNNPPNHP ARSMQDTFYV DLNGDDGIPY NLRPHTSPMQ VRYAHQHIKK YAAEFAAAAA DATGTVKAPE IRVIAPGRTY RVDSDATHSP MFHQCEGLWL GENVSFKDLK VVFTDFCRTF FESDDLVLRF RPSFFPFTEP SAEIDIQFAS GPLAGRWLEV AGSGQVHPNV VRNMGLDPER YIGFAFGMGP DRLTMLRYGV NDLRLFFDGD LRFLSQFQ
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