| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1807 |
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| Symbol | |
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| ID | 7970824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1941276 |
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| End bp | 1941977 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792408 |
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| Product | TonB family protein |
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| Protein accession | YP_002943723 |
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| Protein GI | 239814813 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.390031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTGACC GCTTTGCCCC TCCCCCCTCC GTACTGGGCC TCTCGCGCAA TGCACTCATT
GCCGGGGGCG TGATCCTGTT TCATGCAGCC GCGCTGTGGG CGCTGCAAAG CGGCCTGCTG
CGCCGCGCTG CCGAAGTGGT GATCCCCGTT GAAATCCTGA GCCAGTTCGT CGAGCCGCCC
AAGCCGGCCG AACCGCCGCC TCCTCCTCCA CCGCCGCCGC CTCCGCAGCG CAAGCCCGAA
GCGGTCAAGC CGCCGCCGCG GCCGGTGGCC ATCCGCGAGC CGAAGCCCAC ACCCGCGCCC
AGCGCGCCGG TCGGCGTGCC CGAGCCTCCG CCGCCCGCGC CCGTTGCGGA AGCTCCCGCT
CCCACGCCGC CCGCGCCCCC CGCTCCGCCG CCGGCGCCGC CTGCACCACG GACGATCGAA
ATCTCGGAAG GGCAGACGCG CTACGTCCGC GAACCCAAGC TCGTGTATCC CAGCATGAGC
AGGCGCCTGG GCGAGTCGGG CACCACTGTG GTCTCGATCT ATTTCGACAG CGAAGGCTTT
GCCAAGCGCG TCGAGCTCTT CAAGTCCAGC GGATTCGAGC GGCTCGACGA AGCGGCGCTC
AGCGCCGCCC GCACCGCCCA GGTCACGCCC TTCAGGCAAA CAGGAGGCAA CGCACAGACC
ACCTACCTGC TGCGGGCTCC CTTCTCATTC AAACTGAACT AA
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| Protein sequence | MSDRFAPPPS VLGLSRNALI AGGVILFHAA ALWALQSGLL RRAAEVVIPV EILSQFVEPP
KPAEPPPPPP PPPPPQRKPE AVKPPPRPVA IREPKPTPAP SAPVGVPEPP PPAPVAEAPA
PTPPAPPAPP PAPPAPRTIE ISEGQTRYVR EPKLVYPSMS RRLGESGTTV VSIYFDSEGF
AKRVELFKSS GFERLDEAAL SAARTAQVTP FRQTGGNAQT TYLLRAPFSF KLN
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