| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1799 |
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| Symbol | |
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| ID | 7970816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1934902 |
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| End bp | 1935798 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792400 |
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| Product | Peptidase M23 |
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| Protein accession | YP_002943715 |
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| Protein GI | 239814805 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.129139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGGTT TTGGCAATCG GAGTTGGTGC GCTGGTATCA CGTTGGCCGT TGTGCTCGTG
ATCGCGGGCT GCGCCGCACC GCGAGGGCCG GCACCGGTCG AAGACCGGGG CACGATGACG
CGTGCGCCCA ATGCGGCACC CGGTGGCCCG CTCATCACCA CCGACGCGTC GGGCAAGCCG
CTTCCAGGCA TCGAGAACTA TGGCAAGCCG GGCTATTACG CCGTGCGGCC CGGCGACACG
ATCCGCCGCA TCGGCAACGA AACCGGCCAG AGCTGGCAGA ACATCGTCCG CTGGAACAAT
CTTGAAAATC CCGACCTGAT CGAAGTCGGA CAGGTGCTGC GCGTGGTGCC GCCGGTGGGA
CCGGGCACCG CCGTTGCAAC CGCGCCAGCG TCTTCCTCTT CCGAGGGCGT GGTGACCAAG
CCCGTCGCGC CGCCGTCGGC GGTGGTGCCT GCGGCGCCCG CCAGCGCTGC GGTCGGCAAG
CCGCCAGTGA CGGCGTCGCC GTCGGCGCCC GCAGCAAGCT CGGGCGACGA AGACCTCGGC
TGGATCTGGC CGGCGCACGG CACGCTGCTC GCGGGCTTCG ACGACGCCAA GAACAAGGGC
TTCGACATCG GCGGCAAGGC GGGCGACGCC GTCCTTGCAG CGGCCGATGG CCGCGTGGTC
TATGCCGGCG CCGGTTTGCG CGGCTATGGC AACCTGATCA TCCTGAAGCA CAACAACACC
TATCTCACGG CCTACGCGCA CAACCAGACG CTGCTCGTGA AGGAAGACCA GTCGGTGCAA
AAGGGCCAGA AGATCGCCGA GATGGGCAAC AGCGACGCCG ACCGCGTCAA GCTGCATTTC
GAAATCCGCC GCCAGGGCAA GCCCGTCGAC CCGGCGCGCT ACTTGCCGAG CCGGTGA
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| Protein sequence | MQGFGNRSWC AGITLAVVLV IAGCAAPRGP APVEDRGTMT RAPNAAPGGP LITTDASGKP
LPGIENYGKP GYYAVRPGDT IRRIGNETGQ SWQNIVRWNN LENPDLIEVG QVLRVVPPVG
PGTAVATAPA SSSSEGVVTK PVAPPSAVVP AAPASAAVGK PPVTASPSAP AASSGDEDLG
WIWPAHGTLL AGFDDAKNKG FDIGGKAGDA VLAAADGRVV YAGAGLRGYG NLIILKHNNT
YLTAYAHNQT LLVKEDQSVQ KGQKIAEMGN SDADRVKLHF EIRRQGKPVD PARYLPSR
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