Gene Vapar_1791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1791 
Symbol 
ID7970807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp1929249 
End bp1929923 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content67% 
IMG OID644792391 
ProductPhosphoglycerate mutase 
Protein accessionYP_002943707 
Protein GI239814797 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACCC TCTATCTCGT GCGCCACGGC CAGGCCAGTT TCGGCGCCGC CGACTATGAC 
AACCTGAGCG AGCTCGGCCA CAGGCAGTCC GTGCGCCTTG GCGAATACTG GCGGGAGCGC 
GGCATGCATT TCGATGCCGT GATCACCGGC ACCCTGAAGC GCCATCGCCA GACCTGGGAA 
GGCATTGCCG AGGGGCTCGG GCTGAAGCGC GACGATGTGC TGGCGTGGCC CGGGCTCAAC 
GAGTACGACA GCGAGGCTGT CATCGCCACC ATCCACGAAG GCAAGCTCGA GAAGCCCGAC 
TCGCCCGAGA TGTACCGCCA CCACTTCCGC CTCTTGCGCG ACGGCCTGGG CGCCTGGATG 
CAGGGCCGGA CCCAGCCCGC CGGCATGCCG AGCTACGTCG ATTTCCTGGC GGGCGTGACG 
ACGGCGCTCG ACCATGTGCG CGGCCGCCAC CACGGCGCCA AGGTGCTGGT GGTGTCGAGC 
GGCGGACCGA TCAGCACGGC CGTGGGCCAT GTGCTGGGCA CGAGCCCCGA GACGACGATC 
GAACTGAACC TGCGCATCCG AAACACCGCG GTGACGGAGT TTGCCTTCAC GCCCAAGCGG 
CACATGCTCG TCACCTACAA CACGCTGCCG CACCTGGACG CTCCGGCCTA CGAAGGCTGG 
GTGACCTACG CCTGA
 
Protein sequence
MGTLYLVRHG QASFGAADYD NLSELGHRQS VRLGEYWRER GMHFDAVITG TLKRHRQTWE 
GIAEGLGLKR DDVLAWPGLN EYDSEAVIAT IHEGKLEKPD SPEMYRHHFR LLRDGLGAWM 
QGRTQPAGMP SYVDFLAGVT TALDHVRGRH HGAKVLVVSS GGPISTAVGH VLGTSPETTI 
ELNLRIRNTA VTEFAFTPKR HMLVTYNTLP HLDAPAYEGW VTYA