Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1746 |
Symbol | |
ID | 7974488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1880554 |
End bp | 1881327 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644792345 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002943662 |
Protein GI | 239814752 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCCG CAGCTGCATC ACCCGTCGAA CCCGCGGACG GCGGCGGCTC GCAGGCCGTG AAGGCACAGC TGCGGCTGCG CGAGATGATC CTGGCCGGCG AGCTGCCCGG CGGTGCGCGC ATTGCCGAGG TGGCCATCTC CGAGCAGCTC GGCGTCTCGC GCACGCCGGT GCGCAGCGCC CTCATGCGGC TCGAACAGGA AGGCCTGCTC GAGGCGCTGC CCAACGGCGG CTATGCGGTG CGCACTTTTT CCGAACGCGA CGTGGCCGAT GCGATCGAGC TGCGCGGCAC GCTCGAAGGC CTGGTGGCGC GGCTCGCGGC CGAACGCGGC GCGGCGCCGG TGGTGCTGCG CGAGGCGCGC GCCTGCCTGG CACGCATCGA CGAACTGCTG CGCGAGCCCG CGCTCGACGA CGCGGCCTTC TCGCGGTACG TCACGCACAA CGAGAAGTTC CATTCGCTGC TGTGCGAGAT GGCGGCCAGC CCGGTCATTG CGCAGCAGCT CGAACGCGTG GTCAACCTGC CGTTCGCGTC GCCCTCGGGC TTTGTCATCG TGCAGGCCAA TTCGCCCGCG GCGCGCGACA TGCTCGTGAT CGCGCAGGAC CAGCACCTGC AGGTGCTCGA TGCCATCGAG GCCGGCGAAG GCTCGCGTGC CGAGGCGCTG ATGCGCGAGC ACAGCCGCAT CGCGCGGCGC AACCTGCGCG AGGCGCTGCA TGGCGCGACC ACCGCCGAAC AGCGCCCGCT GCCCGGCGTG CAGCTGATCC GCCGCCGCGG CTGA
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Protein sequence | MKAAAASPVE PADGGGSQAV KAQLRLREMI LAGELPGGAR IAEVAISEQL GVSRTPVRSA LMRLEQEGLL EALPNGGYAV RTFSERDVAD AIELRGTLEG LVARLAAERG AAPVVLREAR ACLARIDELL REPALDDAAF SRYVTHNEKF HSLLCEMAAS PVIAQQLERV VNLPFASPSG FVIVQANSPA ARDMLVIAQD QHLQVLDAIE AGEGSRAEAL MREHSRIARR NLREALHGAT TAEQRPLPGV QLIRRRG
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