| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1727 |
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| Symbol | |
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| ID | 7974469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1858424 |
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| End bp | 1859245 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792326 |
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| Product | GntR domain protein |
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| Protein accession | YP_002943643 |
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| Protein GI | 239814733 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000957079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCCAGA CGACTGCGGG TAATCCCTCA ATTTCCGACG CGGCGACAGA AGTTGCCGCC
GGCACGCCCT TCGTGGGGCG GCCGCGTCCG CGCGCACGCG GGCTCGCCCA CGGGCTGGTC
GAGGACCTGG GCGAAAAGAT CCGCAGCCAG CAGCTGCGCC CGGGCGACAA GCTGCCGACC
GAGTCAGCCA TCATGCAATC CTTCGGCGTC AGCCGCACCG TGGTGCGCGA GGCGCTGTCC
AAGCTGCAGG CCGCGGGGCT GGTGGAAACG CACCACGGCG TGGGCACCTT CGTGCTGCAG
CCGCGCGCGG CCGGCATGTT CCGGCTCGAT TCCGCCGACA TCGCCACCTC GGTGGACGTG
CTGGCGGTGC TCGAGCTGCG CATCAGCCTC GAGACCGAAT CCGCCGGGCT GGCCGCCACG
CGCCGCACCG AGGAGCAGCT GCTCGCGATG CGCCAGGCGC TCGACGATTT CGAGCGCAAC
GTGGCGGTGG CGGGGGACAC CGTGGCGCCC GATTTCCGCT TCCACCTGCA GATCGCCCAG
GCTACCGGCA ACCCGTACTT CGCGGACATC ATGAGCCACC TGGGCACCAC GATCATCCCG
CGCACGCGCA TCACCGCCAT CCGCAACTAC GACCGGCGCG GCGAGTACCT GAGCCGCGTG
AACCGCGAGC ACGAAGAGAT CTACGCGGCC ATCGCGCGCC GCGATCCCGA ATCGGCCCGC
GCGGCCATGC GCATCCACCT GACCAACAGC CGCGAGCGGC TGCGCGTGGC GCAGGAAGCG
GCCCAGCAGG CCGCGGCCAA GACGCCGCCA GCGGCTCCCT GA
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| Protein sequence | MVQTTAGNPS ISDAATEVAA GTPFVGRPRP RARGLAHGLV EDLGEKIRSQ QLRPGDKLPT
ESAIMQSFGV SRTVVREALS KLQAAGLVET HHGVGTFVLQ PRAAGMFRLD SADIATSVDV
LAVLELRISL ETESAGLAAT RRTEEQLLAM RQALDDFERN VAVAGDTVAP DFRFHLQIAQ
ATGNPYFADI MSHLGTTIIP RTRITAIRNY DRRGEYLSRV NREHEEIYAA IARRDPESAR
AAMRIHLTNS RERLRVAQEA AQQAAAKTPP AAP
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