| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1718 |
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| Symbol | |
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| ID | 7974460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1849151 |
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| End bp | 1850242 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792317 |
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| Product | 6-phosphogluconolactonase |
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| Protein accession | YP_002943634 |
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| Protein GI | 239814724 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2706] 3-carboxymuconate cyclase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.042506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCC GCACTCCCAT CCTTCGCGCG CTCCAGGGCG CGGTCGCGCT GCTGTCCGTG
GCCGCCATGG GCCAGGCCTG GGCCGCCACC TGGGTCTACG TGTCCAACGC CGACAGCCAG
GAGATCTCCG TGCTCGAGCT GGATCGCGCC GAAGGCGTGC TCAAGCCGGT GCAGACGCTC
AACGTCGGCG GCACGGTCAT GCCAATGGCC GTGAGCCCTG ACAAGCGCGT GCTCTACGCC
GCGCTGCGCT CGCAGCCGTT CCGCGTGGTC AGCATGTCGA TCGACGCGGC CACCGGCAAG
CTGCAGAAGC TCGGCGAGGC GCCGCTGGCC GACAGCATGG CCAACATCGA CCTCGACGCG
AGCGGCAAGT GGCTCTTCGC GGCCTCCTAC CAGGGCGGAA AGATCTCGGT CAACGCCATC
GGCAAGGACG GCGCGGTGGG GCCGATCCAG CAGCTGGTGC AGACGGGCCC GAACGCGCAC
GCGGTCCACG CCGATGCGAA CAACCGCTTC GTGCTCGCCA CCAGCCTGGG CGGCGACAAC
GTGTCGAGCT GGCGCTTCGA TGCGGACAAG GGGCTGCTCG CGGCCAATGA TCCGCCGCTG
ACCATGAGCA CCGCCAAGTC GGGACCGCGC CACTTCGTCT GGGACAAGGC GCAGCGGCAC
GTCTACCTGC TGAACGAGCT CGACGCGTCC CTGCACGTGT ACGCCTGGGA CGCGGCGCGC
GGCGCGCTCA AGCTGGAGCA GAGCACCACC ACGCTGCCGC CGGGCTTCAC GGGCAAGCCC
TGGGCGGCCG ACCTGCACCT GACGCCCGAC GGGCGCTACC TGTACGCCTC CGAGCGCACC
TCGAGCACGC TCTCGGCGTT CAAGGTGGAC GCGGCGAGCG GCCAGCTGCA GCCGCTCGGC
CAGACGCCGA CCGAGAAAGG GCCGCGCGGC TTCGCGATCG ATTCGAGCGG CCGCTACCTG
ATTGCCGCCG GGCAGGAGTC GCACGGCATT TCGCTGTACC CCATCGATTC CGCGACCGGT
GCGCTGGGCA AGCCCTCGCG CATCACCGCG GGCAAGAACC CGAACTGGAT CGAGATCGTC
GACGCACCCT GA
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| Protein sequence | MNRRTPILRA LQGAVALLSV AAMGQAWAAT WVYVSNADSQ EISVLELDRA EGVLKPVQTL
NVGGTVMPMA VSPDKRVLYA ALRSQPFRVV SMSIDAATGK LQKLGEAPLA DSMANIDLDA
SGKWLFAASY QGGKISVNAI GKDGAVGPIQ QLVQTGPNAH AVHADANNRF VLATSLGGDN
VSSWRFDADK GLLAANDPPL TMSTAKSGPR HFVWDKAQRH VYLLNELDAS LHVYAWDAAR
GALKLEQSTT TLPPGFTGKP WAADLHLTPD GRYLYASERT SSTLSAFKVD AASGQLQPLG
QTPTEKGPRG FAIDSSGRYL IAAGQESHGI SLYPIDSATG ALGKPSRITA GKNPNWIEIV
DAP
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