Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1717 |
Symbol | |
ID | 7974459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1848118 |
End bp | 1849110 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792316 |
Product | hypothetical protein |
Protein accession | YP_002943633 |
Protein GI | 239814723 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.169515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGCC GCACATTGAT TCGCACCGCC CTCGCCTCTT CGCTCGCCGC GGGCCTGCCC GCGTTCGCGC AGGGCCCCGG CAACTGGCCC ACGGGCAAGG CCATCACCTA CCTCGTGCCC TTTCCCGCGG GCGGCACCAC CGACGTGCTG GCCCGCCTGA TCGGCCAGAA GCTCGGCCCG GTGCTGGGCA CGAGCGTGAT CATCGACAAC AAAGGCGGCG CCGGCGGCAG CGTGGGCTCG GAAATCGGCT CGCGCGCAGC GCCCGACGGC TTCATGATGG TGGGCGGCAC GATCAGCTCG CACGCGATCA ACGTGAGCCT GTATCCGAAG CTCGGCTACG ACCCGCAGAA GTCGTTCGCG CCGGTGACGC TGATCGGCAC CAACCCGCTG GTGCTGGTGG TCAACCAGGC CAGCCCCTAC AAGACGCTGA AGGACGTGCT GGAAGCCAGC AAGACCAAGT CGGGCGGGCT CTCGTCGGCC TCGGCCGGCA CCGGCACCTC GCAGCACCTG TCGCTCGAGC TGCTGGCGTT CAAGTCGGGC GTGAAGTTCA CGCACATTCC CTACAAGGGG AGCGGCCCGG CGATCCAGGA CGTGATCGGC GGGCAGGTCG ACATGATGTT CGACACCACC GTGGTGGCGG GTCCGCACAT CCAGAGCGGC AAGCTGCGCG CCATTGCCGT GACCTCGGCC AAGCGCCTGG CCTCGATGCC CGACGTGCCG ACGGTCGCGG AATCCGGCAT TGCGGGATTG CAGGACTTCG AGGTGCTGTC GTGGCAGGCG ATCTTCGTGC CCGCGGGTAC GCCGGCGCCC ATCGTCGAGC GGCTGCACAC CGAGATCCGC AAGATCCTCG CAACGCCCGA GATGCAGGAA AAGCTCAAGG GCTTCGGCAT GGAGCCGGCC GACCTCTCCA CGGCAAAGAT CGCGGCCTTC CAGAAGGCCG AGGTCGAGAA GTGGGCGCAG GTGATCAAGG CCGCGGGCAT CAAGGCGGAC TGA
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Protein sequence | MQRRTLIRTA LASSLAAGLP AFAQGPGNWP TGKAITYLVP FPAGGTTDVL ARLIGQKLGP VLGTSVIIDN KGGAGGSVGS EIGSRAAPDG FMMVGGTISS HAINVSLYPK LGYDPQKSFA PVTLIGTNPL VLVVNQASPY KTLKDVLEAS KTKSGGLSSA SAGTGTSQHL SLELLAFKSG VKFTHIPYKG SGPAIQDVIG GQVDMMFDTT VVAGPHIQSG KLRAIAVTSA KRLASMPDVP TVAESGIAGL QDFEVLSWQA IFVPAGTPAP IVERLHTEIR KILATPEMQE KLKGFGMEPA DLSTAKIAAF QKAEVEKWAQ VIKAAGIKAD
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