| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1701 |
|---|
| Symbol | |
|---|
| ID | 7974769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 1830857 |
|---|
| End bp | 1831732 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644792300 |
|---|
| Product | S-formylglutathione hydrolase |
|---|
| Protein accession | YP_002943617 |
|---|
| Protein GI | 239814707 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0627] Predicted esterase |
|---|
| TIGRFAM ID | [TIGR02821] S-formylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0975891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT CCCTCAAGAC CCTTTCCGAG CACCATGCCT TCGGCGGCGT GCAGAGCTTC
CACGAGCATG CCTCGCACGA GATCGGCCTG CCGATGCGCT TTTCGGTCTA CCTGCCGCCG
CAGGCTGCGC AGGAGCGCGT GCCGGCCCTT CTTTACCTTG CGGGGCTGAC CTGCAACGAG
GAAACCTTTG CAGTGAAGGC CGGCGCGCAG CGCATGGCCG CCAGCCTGGG CCTGGCGCTG
ATCGCGCCCG ACACCAGCCC GCGCGGCAGC ATTGCCGAAA ACCTGCCCGG CGCCACCGCC
CACTGGGACT TCGGCGTTGG CGCGGGCTTC TACCTCGATG CCACCGAAGC GCCCTGGTCC
ACCCACTGGC GCATGGAAAG CTGGATCGTG CACGAGCTGC TGCCGCTGGT GGGGCGGCAC
TTCGCCATCG ACGACCAGCA CCTGGGCATC TTCGGCCATT CGATGGGCGG CCACGGCGCG
CTCACGCTGG CGCTGCGGCA TCCGGGGCGC TTCAAGTCGC TGTCGGCCTT TGCGCCCATC
TGCGCGCCCA CGCAATGCCC GTGGGGCCAG AAGGCGTTCG GCGGCTACCT GGGCGAGCCC
GGCGGCGACC GCGCGCAATG GCTCGCGCAC GACGCCAGCG CGCTCATGAA GTCGCAGACC
GCCGCGCCCT ATCCGCAAGG CATATTGGTC GACCAGGGAC TGGCCGACAA ATTCCTGGCC
GAGCAGCTCA ACCCCGAAGC CTTCGAGGCC GCCTGCTTTG CCGCCGGCCA GCCGCTCACG
CTGCGCCGCC ATGCGGGCTA CGACCACGGC TACTACTTCA TCCAGACCTT CATGGCGGAC
CACATCGCGC ACCACGCGCA AACGCTGCGC GGCTGA
|
|---|
| Protein sequence | MTDSLKTLSE HHAFGGVQSF HEHASHEIGL PMRFSVYLPP QAAQERVPAL LYLAGLTCNE
ETFAVKAGAQ RMAASLGLAL IAPDTSPRGS IAENLPGATA HWDFGVGAGF YLDATEAPWS
THWRMESWIV HELLPLVGRH FAIDDQHLGI FGHSMGGHGA LTLALRHPGR FKSLSAFAPI
CAPTQCPWGQ KAFGGYLGEP GGDRAQWLAH DASALMKSQT AAPYPQGILV DQGLADKFLA
EQLNPEAFEA ACFAAGQPLT LRRHAGYDHG YYFIQTFMAD HIAHHAQTLR G
|
|---|
| |