| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1694 |
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| Symbol | |
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| ID | 7974762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1825520 |
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| End bp | 1826944 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792293 |
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| Product | 6-phosphogluconate dehydrogenase, decarboxylating |
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| Protein accession | YP_002943610 |
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| Protein GI | 239814700 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA ACAAGAGCGA TTTCGGATTG ATCGGCCTGG CCGTGATGGG CCAGAACCTG
GTGCTGAACG TGGAAAGCCG CGGCTTCCAG GTCAGCGTGT ACAACCGCAC CGAAGCCACC
ACCGAGGCCT TCGTGGCCGC CAACCCCGGC AAGAAGCTGG TCGGCGCGAA GACGCTGGAA
GAGTTCGTGC AGAGCCTGGC ACGGCCGCGC AAGATCCAGA TCATGGTGAA GGCCGGCGCA
CCGGTCGACC AGGTCATCGA GCAGCTGATC CCGCTGCTCG ACAAGGACGA CATCGTGATC
GACGGCGGCA ACAGCCTCTA CACCGACACC GAGCGCCGCG ATGCGTACCT TGCCACCAAG
GGCCTGCGCT TCATCGGCGC CGGCGTCTCG GGCGGCGAGG AAGGCGCGCG CAAGGGTCCG
TCGATCATGC CGGGCGGCCC GCTTTCCACC TGGGAAGTGA TGAAACCGAT CTTCGAGAGC
ATCGCGGCCA AGGTCGACGG CGAGCCCTGC GTGATCCACA TCGGCCCCGG CGGCGCGGGC
CATTACGTGA AGATGGTGCA CAACGGCATC GAGTACGGCG ACATGCAGCT GATCTGCGAG
GCCTACAGCC TGTTCAAGGC GGCCGGCTTC AGCACCGACG AGATGGCCGC GGTCTTCAAC
GAATGGAACG AGGGCGAGCT GCAGAGCTAC CTGATCCAGA TCACCGCCAA GGCGCTCGAG
CAGAAGGACC CGGAAACCGG CCAGCCGATC GTCGAACTCA TTCTCGACAA GGCCGGCCAG
AAGGGCACGG GGCAGTGGAC GCTGGTCAAC GCGGCCGAGA ACGCGGTGGT CATCAGCACC
ATCAACGCCG CCGTGGAGGC GCGCGTGCTG TCGTCGCAGA AGACAGCGCG CGTGGCGGCC
AGCAAGCTGC TGCAGGGGCC GAAGGTCGAA CTCTCGCTCG GCAAGAAGGC GCTGGTGGCC
AAGGTGCACG ATGCGCTCTA TGCGTCGAAG GTGGTCAGCT ACACGCAGGG CTTCGACCTG
ATCCAGACCA TGGGCGAGAA GAAGGCGTGG AAGCTCGACC TCGGCGGCAT CGCGGCCATC
TGGCGCGGCG GCTGCATCAT CCGCGCGCGC TTCCTGAACC GCATCACCGA CGCCTACCGC
GCCGACCCGT CACTGGGCAA CCTGATGCTC GACCCCTTCT TCAAGGACCT GCTCAACCGC
ACGCAGCAGA ACTGGCGCGA GGTGGTGGCG CTGGCGGTGG GCAACGGCAT TCCGGTGCCG
GCGTTCAGTG CCTCGCTCGC CTACTACGAC AGCTACCGCA CCGAGCGGCT GCCCGCGAAC
CTGCTGCAGG CGCAGCGGGA CTTCTTCGGG GCCCACACCT ACGAGCGCGT GGACAAGCCG
GCCGGCGAGT TCTTCCACAC CAACTGGCCG GAAGTCATCG GCTGA
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| Protein sequence | MSNNKSDFGL IGLAVMGQNL VLNVESRGFQ VSVYNRTEAT TEAFVAANPG KKLVGAKTLE
EFVQSLARPR KIQIMVKAGA PVDQVIEQLI PLLDKDDIVI DGGNSLYTDT ERRDAYLATK
GLRFIGAGVS GGEEGARKGP SIMPGGPLST WEVMKPIFES IAAKVDGEPC VIHIGPGGAG
HYVKMVHNGI EYGDMQLICE AYSLFKAAGF STDEMAAVFN EWNEGELQSY LIQITAKALE
QKDPETGQPI VELILDKAGQ KGTGQWTLVN AAENAVVIST INAAVEARVL SSQKTARVAA
SKLLQGPKVE LSLGKKALVA KVHDALYASK VVSYTQGFDL IQTMGEKKAW KLDLGGIAAI
WRGGCIIRAR FLNRITDAYR ADPSLGNLML DPFFKDLLNR TQQNWREVVA LAVGNGIPVP
AFSASLAYYD SYRTERLPAN LLQAQRDFFG AHTYERVDKP AGEFFHTNWP EVIG
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