Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1684 |
Symbol | |
ID | 7974752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1816570 |
End bp | 1817226 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644792283 |
Product | glutathione S-transferase-like protein |
Protein accession | YP_002943600 |
Protein GI | 239814690 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.511087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAAAC CCGTTCTCAC GATCAGCAGC AAGAACTACG GCGCCTGGGC GCTGCGCGGC TGGCTGATGT GCAGGCTGGC CGGGCTCGAC TTCAGCGAGA AGATCATCCC GCCCGACGAC CCGGCCATGA AGGCCGAGAT GCTGCTGCTC TCGTCGTCGA TGCTGGTGCC CTCGCTGCAG CACGGCGGCG TCAAGGTGTG GGACACGCTG GCCATCGGCG AATACCTGAA CGAGATCAAG CCCAAGAGCG GGCTGCTGCC GGTCGACATC CAGGCGCGCG CGCATTGCCG CGCCATCTGC GGCGAGATGC ATTCGGGCTT TGCCTCGATG CGCGGCGCCT TGCCGATGAA CATCAAGGCC CGGTTCCGCG GCTTCAAGAT CTGGTCGCGC GCGCAGGCCG ACATCGACCG CATCGTCGCC ATCTGGCGCG AATGCCTCAA GACCTACGGC GGCCCCTTTC TCTTCGGCAA GCAGCCCGGC ATAGCCGACG CCATGTATGC GCCGGTGGTC ACGCGCTTCC TGAGCTACGA CGTGCCGCTC GACAGCGTTT GCGCCGCCTA CTGCAAGCGT GTGATGGACC TGCCCGCCAT GCAGGAGTGG GTGGCCGCCG CGAAGGAAGA GCCCGAGGAA ATCGACGAGC TCGACGCCGA GTTCTAG
|
Protein sequence | MAKPVLTISS KNYGAWALRG WLMCRLAGLD FSEKIIPPDD PAMKAEMLLL SSSMLVPSLQ HGGVKVWDTL AIGEYLNEIK PKSGLLPVDI QARAHCRAIC GEMHSGFASM RGALPMNIKA RFRGFKIWSR AQADIDRIVA IWRECLKTYG GPFLFGKQPG IADAMYAPVV TRFLSYDVPL DSVCAAYCKR VMDLPAMQEW VAAAKEEPEE IDELDAEF
|
| |