Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1645 |
Symbol | |
ID | 7974713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1779399 |
End bp | 1780376 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644792245 |
Product | hypothetical protein |
Protein accession | YP_002943562 |
Protein GI | 239814652 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.115103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGCA CTTGGCGCTA CGGCGCGGGC ATTGTCCTGC TCGCTTCGGC CAGGCTGGCC TCTGCAGACT TCCCAGACAA GCCCGTCACG CTGGTTGTTC CGTTCGCGGC CGGCGGCCCG AGCGACAAGA TCGCCCGGGA CCTGGCCGAG GCACTGCGCA AGCCGCTCGG CCAGACCGTG ATCGTCGACA ACGCCGCCGG TGCGGGAGGC ACGATCGGCT CGGCCAAGGT GGCGCGCGCC ACGCCGGACG GCTATACGCT GCTGGTGCAT CACATCGGCA TGGCCACCGC ACCGGCGCTG TATCGCAAGC TCCCCTACAA AGTGCCTGAT GACTTCGAAA TGCTGGGCCT GATCAACGAA GCCCCATCGG TGGTGATCGG CAAGCCGAGC CTGGAAGCCA CCAGCTTCGC GGACTTGCGC AAGTGGATTG CTGCGAACGG CGGAAAGGTC AACCTGGCCC ATGCAGGGCT GGGCTCCGCG TCGCACCTGT GCGGCTTGAT GTTCCAGAGC GCCTTGAAGA CCAGCATGAC CCCGGTGCCC TACAAGGGAA CCGCACCGGC CATGACGGAC CTCATCGGCG GCCAGGTCGA CCTCATGTGC GAGCAGGCCA CCAACGCCGT GCCGCAGATC GAGGGCAAGA AGGTCAAGGT CTACGGCATC ACGAGCCTGA AGCGCCTGCC GCTGCCATCG CTCAAGGACA CTCCCACGCT CGCGGAGTCC GGGCTCAAGG ATTTCGACGT GCAGGTCTGG CACGGCTTGT ATGCGCCCAA GGGCACGCCG CCCGCGGTGC TGGAAAAGCT GAACGCGGCG CTTCGCACCG CCCTGAAGGA TCCGGAACTC ATCAAGCGCG AAGAGGCGCT GGGCCTCAGC GTGGTGAATG ACGACCGCCT GGCCGCGGCC GGCCACCGGA AGTTCGTGGA AGCGGAGAAG GTCCGCTGGT CGAAGGTCAT CAAGGAAGCC GGCGAATACG CTGACTGA
|
Protein sequence | MKSTWRYGAG IVLLASARLA SADFPDKPVT LVVPFAAGGP SDKIARDLAE ALRKPLGQTV IVDNAAGAGG TIGSAKVARA TPDGYTLLVH HIGMATAPAL YRKLPYKVPD DFEMLGLINE APSVVIGKPS LEATSFADLR KWIAANGGKV NLAHAGLGSA SHLCGLMFQS ALKTSMTPVP YKGTAPAMTD LIGGQVDLMC EQATNAVPQI EGKKVKVYGI TSLKRLPLPS LKDTPTLAES GLKDFDVQVW HGLYAPKGTP PAVLEKLNAA LRTALKDPEL IKREEALGLS VVNDDRLAAA GHRKFVEAEK VRWSKVIKEA GEYAD
|
| |