| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1604 |
|---|
| Symbol | |
|---|
| ID | 7974833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 1732985 |
|---|
| End bp | 1733338 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644792204 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit C |
|---|
| Protein accession | YP_002943521 |
|---|
| Protein GI | 239814611 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit |
|---|
| TIGRFAM ID | [TIGR00941] Multicomponent Na+:H+ antiporter, MnhC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATCG TGCTCGCACT GGCCATCGGC GTACTCAGCG GCTCGGGGGT GTACCTGCTG
CTGCGGCCCC GCACCTTCCA GGTGATCATG GGCCTCACGC TCATCTCGTA CGCGGTCAAC
CTGTTCATCT TCAGCATGGG GCGGCTCAAG CTCGACAGCG AACCGGTGCT GATCCACGGC
ATCACCGCCA CGCTGGCCAA CACCGCCGAC CCGATGCCGC AGGCGCTGGT GCTGACGGCG
ATCGTCATCG GCTTTGCAAT GACGGCGCTG TTCCTCGTGG TGCTGCTGGC CTCGCGCGGC
CTCACCGGCA CCGACCACGT GGACGGCGAA GAGCGGCAGG AGGCAGCGGA ATGA
|
|---|
| Protein sequence | MEIVLALAIG VLSGSGVYLL LRPRTFQVIM GLTLISYAVN LFIFSMGRLK LDSEPVLIHG
ITATLANTAD PMPQALVLTA IVIGFAMTAL FLVVLLASRG LTGTDHVDGE ERQEAAE
|
|---|
| |