| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1594 |
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| Symbol | |
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| ID | 7974823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1722961 |
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| End bp | 1725345 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644792194 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_002943511 |
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| Protein GI | 239814601 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGCCT CCGACTTCTC GAACCTGCCC CACATCGGCG AAGCGCTGCG GCGCAAGGAA
GACTATCGCT TCCTGACCGG CGCGGGCAAC TACACCGACG ACATCACGCT GGCCAACCAG
AGCCATGCGG TCTTCGTGCG CTCGCCGCAC GCCCACGCGG TCATCAAGTC GGTCGACACC
GCCGAGGCGC TCAAGATGCC CGGCGTGGTC GGCATCTTCA GCGGCAAGGA CATCGAGGGC
AAGATGGGCG GCCTGCCCTG CGGCTGGCTC ATCAACAACC CCGACGGCAC CCCCATGAAG
GAGCCGATGC ACCCGATCCT CGCGATCCAC AAGGTGCGCT ACGTGGGGGA CCACGTGGCG
ATGGTGGTGG CCGAAACCGT CGAGCAGGCC AAGAACGCGG CCGAGGCCGT GGTGGTCGAC
TACGACGTGC TGCCCGCCGT CGTGAGCGTG GCCGATGCGG CCAAGAAGGC GAGCGGCGTC
ACGCTGCACG ACGAGGCGCC CGACAACCAG TGCTACAAGT GGGCGCTGGG CGACAAGGCC
GCGGTCGATG CGGCGTTTGC CAATGCCGCG CACGTCACCA AGCTCGACCT CGTCAACAAC
CGGCTGATCC CGAACCCGAT CGAGCCGCGC GTGGCCATCG GCAGCTACAG CCGCGGCACC
GACGACTACA CGCTCTATGT GTCCAACCAG AACCCGCACG TCGAGCGCCT GCTGATGACG
GCCTTCGTGC TGGGCCTGCC CGAGCACAAG GTGCGCGTGA TCGCGCCCGA CGTGGGCGGC
GGCTTCGGCT CCAAGATCTT CCTCTACGCC GAAGACGTGT GCCTGACCTG GGCCGCCAAG
CAGCTCAACC GCAACATCAA GTGGACGGCC GAGCGCTCGG AGTGCTTCCT GTCCGACGCG
CACGGCCGCG ACCATGTGAG CCATGCCGAG ATGGCGATGG ACAAGGACGG CAAGTTCCTC
GCGATGCGGG TGCACACCGA CGCCAACCTG GGCGCCTACC TGTCGACCTT CTCCACGGCC
GTGCCCACCA TCCTCTACGC CACGCTGCTC GCGGGCCAGT ACACCACGCC GCAGATCTAC
GTCGAGGTCG ATGCCTGGTT CACCAACACC GCGCCGGTCG ATGCCTACCG CGGTGCGGGC
CGGCCCGAGG CCACCTACCT GCTCGAGCGC CTGGTGTCGC GCTGCGCCTG GGAAATGAAC
CTCGGCCAGG ACGAGATCCG CAAGCGCAAC TTCATCACCA CCTTTCCCTA CCAGACGCCG
GTGGCGCTGC AGTACGACAC GGGCGATTTC CACGCCTGCA TGGACAAGGC CCGCGTGCTG
GCCGACGTCG ATGGCTATGC GCAGCGCAAG TCGGCCAGCG AGGCCGCGGG CAAGCTGCGC
GGCATCGGCT ACTCGAGCTA CATCGAGGCC TGCGGCATCG CGCCGTCGAA CATCGCCGGG
GCGCTGGGCG CGCGGGCCGG CCTGTTCGAG TGCGGCGAGA TCCGCGTGCA CCCCACCGGC
AGCGTGACGG TGTTCACCGG CTCGCACAGC CACGGCCAAG GGCACGAAAC CACCTTTGCG
CAAGTGGTGG CGGCGCGCCT GGGCATTCCG GTGGACAACG TCGACGTGGT GCATGGCGAC
ACCGGCCGCG TGCCCTTCGG CATGGGCACC TACGGCTCGC GCTCCATCTC GGTGGGCGGT
GCCGCCATCA TGAAGGCGCT CGACAAGATC GAGACCAAGG CCAAGAAGAT CGCCGCGCAC
CTGATGGAGG CGAGCGATGC CGACATCGAG TTTGCGAACG GCGAGTTCAC GGTCAAGGGC
ACCGACAAGA AGATCCCGTT CGGCCAGGTG GCGCTCACGG CCTACGTGCC GCACAACTAT
CCGCTCGACA AGCTCGAGCC CGGCCTGAAC GAAACCGCCT TCTACGACCC GACCAACTTC
ACCTTCCCGG GCGGCACCTA CATCTGCGAG GTCGAGGTCG ACAAGCAGAC CGGTGAAGTG
CGCGTGGACC GCTTCACCGC GGTGGACGAC TTCGGCACCA TCATCAACCC GATGATCGTC
GAGGGCCAGG TGCACGGCGG GCTGGTGCAG GGCATCGGCC AGGCGCTGCT CGAGAACTGC
GTGTACGACA ACGAGACCGG CCAGCTGCTC ACCGGCAGCT TCATGGACTA CGCCATGCCC
AGGGCGGGCG ACTTTCCGCA GTTCAAGCTC GACACCGTGT GCACGCCGTG CACGCACAAC
CCGCTGGGCA CCAAGGGCTG CGGCGAGGCG GGGGCCATCG GTTCGCCGCC GGCCGTGATC
AACGCCGTGC TCGACGCGCT GGCGCCGCTG GGCGTCAAGG ACTTCGACAT GCCCGCATCG
GCCAGCCGCG TCTGGGAAGC GATGCAGGCG GCCGCCTCCC ACTAG
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| Protein sequence | MGASDFSNLP HIGEALRRKE DYRFLTGAGN YTDDITLANQ SHAVFVRSPH AHAVIKSVDT
AEALKMPGVV GIFSGKDIEG KMGGLPCGWL INNPDGTPMK EPMHPILAIH KVRYVGDHVA
MVVAETVEQA KNAAEAVVVD YDVLPAVVSV ADAAKKASGV TLHDEAPDNQ CYKWALGDKA
AVDAAFANAA HVTKLDLVNN RLIPNPIEPR VAIGSYSRGT DDYTLYVSNQ NPHVERLLMT
AFVLGLPEHK VRVIAPDVGG GFGSKIFLYA EDVCLTWAAK QLNRNIKWTA ERSECFLSDA
HGRDHVSHAE MAMDKDGKFL AMRVHTDANL GAYLSTFSTA VPTILYATLL AGQYTTPQIY
VEVDAWFTNT APVDAYRGAG RPEATYLLER LVSRCAWEMN LGQDEIRKRN FITTFPYQTP
VALQYDTGDF HACMDKARVL ADVDGYAQRK SASEAAGKLR GIGYSSYIEA CGIAPSNIAG
ALGARAGLFE CGEIRVHPTG SVTVFTGSHS HGQGHETTFA QVVAARLGIP VDNVDVVHGD
TGRVPFGMGT YGSRSISVGG AAIMKALDKI ETKAKKIAAH LMEASDADIE FANGEFTVKG
TDKKIPFGQV ALTAYVPHNY PLDKLEPGLN ETAFYDPTNF TFPGGTYICE VEVDKQTGEV
RVDRFTAVDD FGTIINPMIV EGQVHGGLVQ GIGQALLENC VYDNETGQLL TGSFMDYAMP
RAGDFPQFKL DTVCTPCTHN PLGTKGCGEA GAIGSPPAVI NAVLDALAPL GVKDFDMPAS
ASRVWEAMQA AASH
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