Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1577 |
Symbol | |
ID | 7974806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1706189 |
End bp | 1707298 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644792177 |
Product | transcriptional regulator of molybdate metabolism, LysR family |
Protein accession | YP_002943494 |
Protein GI | 239814584 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1910] Periplasmic molybdate-binding protein/domain |
TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAACAGA TCGACCTTTC CTACGCGATC CGGCCCCGCC GCAGCGGATC GCGGCAGATC CGCAATCCGC TGATGCAGAT CCTGCAGGCG GTGCGCGAGC ACGGCTCCAT CTCGGCCGCG TCGCGCGCGC TCGACCTGTC CTACCGCCAT GTGTGGGGCG AGCTCAAGCA CTGGGAGCAG GCGCTCGGCC ATCCGCTGAT ACAGGGCGAG CAGGGCCAGC GCGCGCAGCT TTCCGAATTC GGCGACAAGC TGCTGTGGGC CGAGCGCCAG GCCCAGGCCC GGCTCGCGCC GCAGATCGAG GCGCTGCATG CCGAACTGGA GCGCGCCTTC GCCCTCGCCT TCGACGACCG CACCCATGTG CTGAGCCTGC AAGCCAGCCA CGACGACGCG CTCGCGCTGC TGCGCACGCA TGCGGCGGGC ACCGCGCAGC TGCATCTGGA CATCCACTTC ACCGGCAGCG TCGATGCGAT CCGCGCGCTC AACCAGGGCC GCTGCGTGAT GGCGGGCTTC CATACGCTGG AGCACCCGCC GCGCGGCTCG CTGGCGCAGC GCACCTACCA GCCGCTGCTC AAGCCGGGTC AGCACAAGCT GATCGGATTC GCGCGGCGCA CGCAGGGCCT GCTCGTGGCG CCGGGCAACC CGCTCAACCT GCGCTCGCTG GCCGACGCGG CGCGGCTGCG CGCGCGCTAC GTCAACCGGG CCATCGGCAC CGGCACGCGC CTGCTGCTGG ACGAACTGCT GGCAGAAGCC GGTCTCGACG CCTCAGCGCT CGCGGGCTAC GAGCGCTGCG AAACCTCGCA TGCCGCGGTC GCGCATGCCG TGGCGTCCGG ACAGGCCGAT GCGGGGCTCG GGCTCGAATC TGCCGCGCAC GCCGAAGGGC TCGACTTCGT GCCGCTGGTG CGGGAGCGCT ACCACCTGGC CTGCCTCAAG TCGGCGCTCG ACCAGCCCGC CATGCAGGCG CTGGTGGCGG TGCTGCAGAG CGCAAGCTGG CAGCACCTGC TGGAGACGCT GCCCGGCTAC GAGGCTGCGG CCAGCGGCGA GGTGCAGTCG CTGCGCGCGC TGCTGCCGTG GTGGACCTTC GCGCGCGAGA AGAAGGCTCA CGGGCATTGA
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Protein sequence | MQQIDLSYAI RPRRSGSRQI RNPLMQILQA VREHGSISAA SRALDLSYRH VWGELKHWEQ ALGHPLIQGE QGQRAQLSEF GDKLLWAERQ AQARLAPQIE ALHAELERAF ALAFDDRTHV LSLQASHDDA LALLRTHAAG TAQLHLDIHF TGSVDAIRAL NQGRCVMAGF HTLEHPPRGS LAQRTYQPLL KPGQHKLIGF ARRTQGLLVA PGNPLNLRSL ADAARLRARY VNRAIGTGTR LLLDELLAEA GLDASALAGY ERCETSHAAV AHAVASGQAD AGLGLESAAH AEGLDFVPLV RERYHLACLK SALDQPAMQA LVAVLQSASW QHLLETLPGY EAAASGEVQS LRALLPWWTF AREKKAHGH
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