| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1575 |
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| Symbol | |
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| ID | 7974804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1703390 |
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| End bp | 1704682 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644792175 |
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| Product | protein of unknown function DUF323 |
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| Protein accession | YP_002943492 |
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| Protein GI | 239814582 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1262] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03440] conserved hypothetical protein TIGR03440 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCCGC CGTCGCCGCC CCTGTTGCCC GCGGGCTTGC CGCACTCCAT CGACTCGCCC
GACATGCAGC GCGCCGGCCG CGAGCTGCTC TCGCTGGCCC TGATCGATGC GCGCAACCAC
ACCCTTCATC TGCTCTCGCT CTACGAGGAG GCGCTGGGCT CGCCCGCGCT CGCGGTGGAG
CGCACGGGCG ATGCGGGCGT GGTGCCGCCG CTCTGGCTGG CGGGGCACAT CGGCTGGTTT
GCCGAATGGT GGATCGGGCG CAACACCCAG CGCGCCTTCG GCGCCGACTG CCCGGTTCGG
CCGACCCGGC TGGCCGCCAT CGAGCCCGCT GCCGACGACT GGTGGAACCC GGCCCAGGTC
TCGCCCGCGC AGCGCTGGTC GCCCGGCCTG CCGGACCTCG CCCAGACCAA GGCCTACCTG
CTCGAAACGC TGGAGAGCAC GCTCGAGCTG CTCGAGCATG CGGCCGAGAC CGATCCGGGG
CTTTACTTCT ACCGCCTCGC GCTCTTCCAT GAAGACCTGC GCGGCGAGCA GTTCATCGTG
ATGGCACAGA CGCTGGGGCT GCCTTTGGGC ATCGATCCGA TGCCTGCGGC CGTCACGCGC
GAGCCGCTGC TGCTGCCCGC GACGCAATGG GAGCTCGGCC TGCCCGAGGG CTGCGGCTTC
GCCTTCGCGC AGGAGCAGGG CGCGCACCGC GTCGAGGTGC CCGAATTCGA GATCGACGCC
CAGCCCGTGA CCTGGAGCCA GTACATCGAA TTCGTCGACG AGGGCGGCTA CGACCGCGAG
GAGCTCTGGC ATCCGCAGGG CTGGCGCTGG CTCGCCTCGC AGATCGAAGG GCGCCGCGGG
CCGCGCCATA TCGAGCAGAT CGGCGTCGCG CGCAACGGCA CCGGCGGCTC GGTGCTGCAG
CACCGTTTTG GTGCCACCGT GCGTGCGGCC GGCCACCACA GCGCGGTGCA CCTGAGCTGG
TGGGAGGCCG ATGCCTGGGC GCGCTGGGCC GGCCGGCGCA TCGCGACCGA GATCGAATGG
GAGATTGCGG CGCACACGGC GGCGCGGCGC GGATTCCGCT GGGCCGACGT GCACGAGTGG
ACCGCGGGCA CGCTGCGGCC CTGGCCCGGC TTTCGCGCCG ATCCCTGGAG CGCGGGCAGC
GAGTTCGATC CCGTGCCTGC ATTCGGCGAG GCGCGCGTGC TGCGCGGCGC GTCGTTCGCG
ACCCGCTCGC GCCTGCGTTC GCCGCGGCGC CGCAGCTTTG CATTGCCCGG GCGCGACGAT
GGTTTCTTCG GCTTCAGGAC CTGTGCACTT TGA
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| Protein sequence | MPPPSPPLLP AGLPHSIDSP DMQRAGRELL SLALIDARNH TLHLLSLYEE ALGSPALAVE
RTGDAGVVPP LWLAGHIGWF AEWWIGRNTQ RAFGADCPVR PTRLAAIEPA ADDWWNPAQV
SPAQRWSPGL PDLAQTKAYL LETLESTLEL LEHAAETDPG LYFYRLALFH EDLRGEQFIV
MAQTLGLPLG IDPMPAAVTR EPLLLPATQW ELGLPEGCGF AFAQEQGAHR VEVPEFEIDA
QPVTWSQYIE FVDEGGYDRE ELWHPQGWRW LASQIEGRRG PRHIEQIGVA RNGTGGSVLQ
HRFGATVRAA GHHSAVHLSW WEADAWARWA GRRIATEIEW EIAAHTAARR GFRWADVHEW
TAGTLRPWPG FRADPWSAGS EFDPVPAFGE ARVLRGASFA TRSRLRSPRR RSFALPGRDD
GFFGFRTCAL
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