| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1551 |
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| Symbol | |
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| ID | 7974780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1675509 |
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| End bp | 1676969 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792151 |
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| Product | N-acyl-D-amino-acid deacylase |
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| Protein accession | YP_002943468 |
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| Protein GI | 239814558 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAC TCAAAAACCA CTACGACCTG CTGATCCGCG GCGGCACCGT GATCGACGGC
ACCAAGGCGC CGCGCTTCGA GGCCGACGTG GGCATCGCCC GTGGCCGCAT CGCCGCCATC
GGCAACCTCG CAGGCCACAC CGCCGACCGG ACGCTCGACG CCGCCGGCCG CATCGTCGCG
CCCGGCTTCA TCGACTCGCA CACGCACGAC GACCAGGCCG TGCTCTCGCA GGCACAGATG
CCGTTCAAGG TGTCGCAGGG CGTGACCACC GTGATCGCGG GCAACTGCGG CATCAGCGCC
GCGCCGCTGC GCGAGGACAT GGAGCTGCCG ATGCCGCTGA GCCTGCTCGA GTCGCCGGCC
GCGGGCCGGT TCACCAGCTT CGCGGCGTAT CTCGATGCGC TGCGCGCCAC GCCATCGTCC
GTGAACGTGG CCGCGATGGT CGGCCACTCG ACCCTGCGCG CCGTGGTCAT GTCCGACCTC
GACCGCCCCG CCGACGACAG CGAGATTGCC GCCATGCAGG CGCTGGTCGA AGAAGCGATG
CAGGCTGGCG CCATCGGCCT GTCGACCGGC ACCTTCTATC CGCCCGCGGT GAAGGCAACG
ACCGAAGAGA TCATCGAAGT CGGCCGCCCG CTCAGCGCGC GCAGGGCGCT CTACGTGACG
CACATGCGCG ACGAGGCGGA CCGCGTGATG GAGTCGCTCG AAGAAACCTT CCACATCGGC
CGCGCGCTCG GCGTTCCCGT GGTGGTGTCG CACCACAAGG TGCAGAACGC GCAGAACTTC
GGCAAGAGCA AGGTCACGCT GCCCTTCATC AAGGAAGCGA TGCGCCACCA GTGCATCGGG
CTCGACTGCT ACCCCTACAC GGCGGGCTCC ACCATGATCC GCACCGACCG CGGCATGATG
GATGGCCGCG TGCTGATTGC ATCGAGCGTG CCGCACCCCG AATGCGCCGG CCGCGACCTG
AAGGACATCG CGGCCGAATG GGGCGTGTCC GGCGAAGAGG CGGCCAAGCG GCTTTCGCCC
GGCAGTGCGA TCTATTTCAT GATGGACGAG GACGACGTGC AGCGCATCCT CGCCTTCGAA
GACACCATGA TCGGCTCCGA CGGCATTCCG CTCGGCGAGA AGCCGCATCC GCGGCTCTGG
GGCACCTTCC CGCGCGTGCT GGGCCACTAC AGCCGCGACG TCGGCCTGTT TCCGCTGGAG
ACGGCGGTGT GGAAGATGAC CGGGCTCACC GCGCGCAACT TCGGGCTGCA CGAGCGCGGC
GCGCTGAAGC CGGGTCACCA TGCGGACGTG GTGATCTTCG ATGCCCAGGC GGTGCGCGAC
ACGGCCAGCT ACGCGTCGCC GACCTTGCCG GCCGAAGGCA TCGATGCGGT GATCGTGAAC
GGCGCCGTCA CCTGGCAGCA CGGCGCGCAC AGCGGCGCGC GCAACGGGCA GGTGATCACG
CGGCGCGACG CGAAGGCCTG A
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| Protein sequence | MSTLKNHYDL LIRGGTVIDG TKAPRFEADV GIARGRIAAI GNLAGHTADR TLDAAGRIVA
PGFIDSHTHD DQAVLSQAQM PFKVSQGVTT VIAGNCGISA APLREDMELP MPLSLLESPA
AGRFTSFAAY LDALRATPSS VNVAAMVGHS TLRAVVMSDL DRPADDSEIA AMQALVEEAM
QAGAIGLSTG TFYPPAVKAT TEEIIEVGRP LSARRALYVT HMRDEADRVM ESLEETFHIG
RALGVPVVVS HHKVQNAQNF GKSKVTLPFI KEAMRHQCIG LDCYPYTAGS TMIRTDRGMM
DGRVLIASSV PHPECAGRDL KDIAAEWGVS GEEAAKRLSP GSAIYFMMDE DDVQRILAFE
DTMIGSDGIP LGEKPHPRLW GTFPRVLGHY SRDVGLFPLE TAVWKMTGLT ARNFGLHERG
ALKPGHHADV VIFDAQAVRD TASYASPTLP AEGIDAVIVN GAVTWQHGAH SGARNGQVIT
RRDAKA
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