Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1510 |
Symbol | |
ID | 7973108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1634277 |
End bp | 1635053 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644792108 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002943427 |
Protein GI | 239814517 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCAA ATTCACTGAC CGGCCGCCAT GCCCTCGTCA CCGGCGCCGC GCGCGGCATC GGCGCCGAGA TCGCCCGCAC CCTGGCTGCC GAGGGCGCAA CGCTCACGCT GCTGGGACGC GACCTCGATT CACTCCGGCG CGTGGCCGCG ACGCTCGCGG GCCAGGGCCA CGGCGTGGCC GCAGCGGACG TGGCCGACGC GCAGGCCGTG CAGTCGGCCT TCGCGCTGGC GCGTGCCGAG CGCGGGCCGC TCGCCATCCT CGTCAACAAT GCGGGCGCAG CAGAGAGCGC GCCTTTTCTC AAGACCTCGG CCGAGCTCTG GCAGCGCATG CTGTCGGTGA ACCTCACCGG CACGTTCCTG TGCACGCAGG CCGCGCTGCC CGACATGCTC GAAGCCGGCT GGGGCCGCAT CGTCAACATC GCCAGCACCG CGGGCCAGAA GGGCTATGCC TACGTCGCGG CCTATGCGGC GGCCAAGCAT GGCGTGGTCG GGCTCACGCG CTCGCTCGCG CTCGAGGTGG CACGCAAGGG CGTCACGGTG AACGCGGTGT GCCCCGGCTA CACCGACACC GACATCCTGC GCGCGAGCGT TGCCAACGTG GTAGGCAAGA CCGGCCGCAG CGAAGCCGAT GCGCTGGCCG AGTTCTCCAG CGCCAATCCG CAGCGGCGCA TCGTGCAGCC CGCCGAAGTG GCCGACGCGG TGCGGTGGCT CTGCGGGGAG GGCGCCGCAT CCGTCACGGG GCAATCGGTC TCGGTGTCCG GCGGGGAGGT GATGTGA
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Protein sequence | MHANSLTGRH ALVTGAARGI GAEIARTLAA EGATLTLLGR DLDSLRRVAA TLAGQGHGVA AADVADAQAV QSAFALARAE RGPLAILVNN AGAAESAPFL KTSAELWQRM LSVNLTGTFL CTQAALPDML EAGWGRIVNI ASTAGQKGYA YVAAYAAAKH GVVGLTRSLA LEVARKGVTV NAVCPGYTDT DILRASVANV VGKTGRSEAD ALAEFSSANP QRRIVQPAEV ADAVRWLCGE GAASVTGQSV SVSGGEVM
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